Lates calcarifer (barramundi perch): 108881359
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Entry
108881359 CDS
T04895
Name
(RefSeq) LIM/homeobox protein Lhx4
KO
K09374
LIM homeobox protein 3/4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108881359
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
108881359
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
108881359
NCBI-ProteinID:
XP_018528831
UniProt:
A0A4W6FTA5
LinkDB
All DBs
Position
LG17:12970661..12981558
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AA seq
390 aa
AA seq
DB search
MMQSAAVLPTESPVKSLPEILGVPLQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCAD
CQTPLADKCFSRAGGVYCKEDFFKRFGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACIM
CSRQLATGDEFYLMEDGRLVCKVDYETAKQNDDSEAGTKRPRTTITAKQLETLKSAYKNS
PKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRWTQFYKSVKRSRGGAK
VEKESSADDAGLSDSELSFRDDQVLSDLGHANGLYGSVGDVTNSAVLNGGFSVDASGQPY
HDIRAGSPYGLPQSPSSITSVPGHTPLLNNLGFSMDSLVAAQGGPGGVGQALRAMAGGPT
SDLSTGSSTGYPDFPTSPASWLDEMDHSQF
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaagtgcggcggtcctaccgacagagagtcctgtaaagagtttaccggagatt
ctcggagtgccactgcaacagatccctcagtgtgcgggctgtagtcagcacatcctggac
aagttcatcctgaaggtgctggacagacactggcactccaagtgcctcaagtgcgccgac
tgtcagactccgctggcggacaaatgtttctcccgggcaggaggcgtctactgcaaggag
gatttcttcaagcgttttggaacaaaatgtgcatcatgccaacaggggatccctccaaca
caggttgtgcggaaggcgcaggactttgtgtatcacctgcactgtttcgcctgcatcatg
tgcagtcggcagctggccaccggagacgagttttacctcatggaagatgggaggctggtg
tgcaaggtggattatgagactgcaaaacaaaacgatgattcagaggcggggaccaagcga
ccaaggaccaccatcactgcgaagcagctggagaccctcaaaagtgcctacaaaaactcg
ccgaagccagcacgccacgtcagagagcagctgtcttcggagactgggctggacatgaga
gtagtgcaggtttggttccagaaccgacgagcaaaggaaaagcgtctgaagaaggacgca
ggccggcatcgctggactcagttttataaaagtgtcaaacgtagccgaggaggagctaaa
gtggagaaggagagctcggccgacgacgcaggactcagtgacagcgaactgagcttcaga
gatgaccaggtgctgtcagatctcggccacgccaacgggctttacgggagcgtcggcgac
gtgaccaacagcgcggtgctgaacggcggtttctctgtcgatgcatcgggccagccctac
cacgacatccgagcaggaagtccctacggtctccctcagtcgccctcctccatcacctct
gtgcccggccacacccctctcctcaacaacctgggcttcagcatggacagtctggtggcc
gcacagggggggccaggcggcgtggggcaggctctgagggccatggcggggggccccacc
tcagacctctctacgggcagcagtacgggataccctgacttccccaccagccccgcctca
tggctggacgagatggaccattcccagttttga
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