Lates calcarifer (barramundi perch): 108881368
Help
Entry
108881368 CDS
T04895
Symbol
calr
Name
(RefSeq) calreticulin
KO
K08057
calreticulin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
lcf04145
Phagosome
lcf04148
Efferocytosis
lcf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108881368 (calr)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108881368 (calr)
04148 Efferocytosis
108881368 (calr)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108881368 (calr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108881368 (calr)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
lcf04091
]
108881368 (calr)
Chaperones and folding catalysts [BR:
lcf03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
108881368 (calr)
Lectins [BR:
lcf04091
]
L-type lectins
108881368 (calr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
DDHD
Motif
Other DBs
NCBI-GeneID:
108881368
NCBI-ProteinID:
XP_018528852
UniProt:
A0A4W6G301
LinkDB
All DBs
Position
LG17:complement(12690107..12695815)
Genome browser
AA seq
426 aa
AA seq
DB search
MTALSLLLVAVAAASALAESTVYFREQFEDGDAWTSRWVESKHKSDYGKFVLTAGKFYGD
AEKDKGLQSSQDARFYALSARFDDFSNQGQPLVIQFTVKHEQSIDCGGGYIKLFPSDLSQ
EDMHGDSVYNIMFGPDICGPGTKKVHVIFNYKGKNHLINKDIRCKDDEYTHLYTLIVNPD
NTYEVKIDNKKVESGNLEDDWDFLPPKKIKDPEAKKPEDWDDREKIPDPDDKKPEDWDKP
ENIPDPDAKKPDDWDDEMDGEWEPPMVTNPDYKGEWKPREITNPAYKGKWIHPEIDNPEY
TADSEIYKYNSIGVIGLDLWQVKSGTIFDNFLITNDPNLAEEVGNDTWGKTKDAEKKMKE
GQEEEERKKREEEDKQRRDEAKEEEEEEEEEKDEEEEDEEEEEGEEQEEEEEEDDEGTDS
KLKDEL
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgacagccctgtcgcttcttttggtggccgtggcggccgcgtctgccctggccgagtcc
actgtgtatttccgagagcaatttgaagacggggatgcctggacaagtcgctgggtggag
tccaagcacaagtcagactacggcaagtttgtcctgacagccgggaagttctatggagat
gcagagaaagacaaaggtctgcaatccagccaggacgcccgcttctacgccctgtcggca
cgttttgatgacttcagcaaccagggccagcccctagtcatccagttcactgtgaaacat
gagcagagcatcgactgtggtggaggttatattaaactgttcccctctgacctcagccag
gaggacatgcacggagactctgtatacaacatcatgtttggtcctgatatttgtggccct
ggtacaaagaaggttcatgttatcttcaactacaaaggcaagaatcatttgatcaacaag
gacatcagatgcaaggatgatgagtacacccacttgtacacgctgattgtcaaccccgac
aacacgtacgaggtcaagatcgacaataagaaggttgagtcgggcaatctggaggatgac
tgggacttcctgccccccaaaaaaatcaaggatcctgaagccaaaaagccagaggactgg
gatgacagggagaagattccagaccccgacgataagaaaccagaggactgggacaagcct
gagaacatcccagatcctgatgctaagaagcccgatgactgggatgacgagatggacgga
gaatgggagccacctatggtcaccaaccctgattacaagggtgagtggaagcccagagaa
atcaccaatcctgcctataagggcaagtggatccaccctgagattgacaacccggagtac
acagccgattctgagatctataaatacaatagcattggtgtgattggactcgacttgtgg
caggttaagtccggtaccatctttgacaacttcctgatcaccaatgacccaaatctggca
gaagaagtaggcaatgacacgtggggtaaaactaaggacgcagagaagaagatgaaggaa
ggccaagaggaagaggagagaaagaagcgtgaggaggaggacaagcagaggagagatgag
gcaaaggaggaagaggaggaggaggaggaggagaaggatgaggaggaggaagacgaagag
gaagaggaaggggaagagcaggaggaggaggaagaggaggatgatgaaggcacagattct
aaactcaaggatgagttataa
DBGET
integrated database retrieval system