Lates calcarifer (barramundi perch): 108881461
Help
Entry
108881461 CDS
T04895
Symbol
c1galt1lb
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00512
Mucin type O-glycan biosynthesis
lcf00514
Other types of O-glycan biosynthesis
lcf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
108881461 (c1galt1lb)
00514 Other types of O-glycan biosynthesis
108881461 (c1galt1lb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lcf01003
]
108881461 (c1galt1lb)
Enzymes [BR:
lcf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
108881461 (c1galt1lb)
Glycosyltransferases [BR:
lcf01003
]
Glycan extension
Type 3 chain
108881461 (c1galt1lb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
108881461
NCBI-ProteinID:
XP_018529008
UniProt:
A0A4W6EKI3
LinkDB
All DBs
Position
LG12:complement(21625012..21633514)
Genome browser
AA seq
397 aa
AA seq
DB search
MKALGSRFSFYAGFVVGTFTLYVFLRQVWFERTMSAQQPSSVTKFHDHSEEEGEIWKKER
SALFNLKHPHHTGEDSRMADELYKKVRILCWVMTGPNNLEKKARHVKSTWSRHCNVVVFM
SSVDDPDFPTVGLGTKEGRDQLYWKTIRAFHYAYEHHGHEADWFLKADDDTYVIVDNLRW
VLANHTPEEPIYFGRRFKPYTKQGYMSGGAGYVLSKEALRRFVEGFKNKQCTHTTSVEDL
AMGQCMEKVGVLAGDSRDTAHRETFHPFVPEQHLTAKFPKSFWYWSYCYYPISEGPNCCS
DVSVSFHYVDALHMYLLEYYTYHLRAFGYRYRYQPPGPQGYSIEKSGSSEVSEGQRELVS
QVKGRKEGGDVSRTDERQDADPPPAAGKDPPAAPVNK
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccctcggatccagattctccttttatgcgggttttgtggtgggaaccttcaca
ctctacgtgtttctacggcaagtgtggtttgagaggactatgtcagctcagcagcccagc
agcgtgactaaatttcatgaccacagtgaggaagagggggagatatggaagaaggagaga
tctgctcttttcaacctgaaacaccctcatcatacaggtgaggatagccgcatggctgat
gaactatacaaaaaggtacgcattctctgctgggtgatgactggacccaacaacctggag
aagaaggctcggcatgtgaagtccacttggagccgtcactgcaacgttgtggtcttcatg
agctctgtagatgaccccgacttccccactgtgggattaggcacaaaggaaggtcgggat
cagctgtactggaaaacgatccgggctttccattatgcctacgagcatcatggccacgag
gcggattggttcctcaaggcggatgacgacacctacgtaattgtagacaacctgcggtgg
gttctcgcgaaccacacgccggaggagccgatttactttggccgcagattcaagccctac
accaagcagggctatatgagcggcggagcgggttacgtgctgagcaaagaggctctgcgg
cgatttgtagagggttttaaaaacaaacagtgcactcacactacctctgtggaggaccta
gcaatggggcagtgcatggagaaagtcggggtgctggcaggagactccagagacactgca
cacagggagacatttcacccctttgtccctgagcagcacctcactgccaagttccccaag
agcttctggtattggagctactgctactaccccatctcagagggcccaaactgctgctca
gacgtgtcggtgtccttccactatgtagacgctttacatatgtatttattggagtactac
acctatcacctgcgtgcctttggatacagatatcgttaccagccccccggcccacaaggc
tacagtattgagaagtcaggttcctctgaagtttcagaaggacaaagagaactggtttct
caggtgaaaggacgaaaagagggcggtgatgtgtccagaactgacgagagacaggatgca
gatccccctcctgcagctggtaaagaccctcctgctgcaccggtgaacaaataa
DBGET
integrated database retrieval system
