Lates calcarifer (barramundi perch): 108881483
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Entry
108881483 CDS
T04895
Name
(RefSeq) von Hippel-Lindau disease tumor suppressor
KO
K03871
von Hippel-Lindau disease tumor supressor
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108881483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108881483
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
108881483
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GFIT
Motif
Pfam:
VHL
VHL_C
Motif
Other DBs
NCBI-GeneID:
108881483
NCBI-ProteinID:
XP_018529034
UniProt:
A0A4W6EIF6
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Position
LG12:21796128..21798975
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AA seq
169 aa
AA seq
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MPQEGEQSLPLVRSLNSRIQINALFCNRTPRVVRPLWINYLGRPHPYADIQPGRTRRMTT
FVGHPWMFRDAETDEPLKVNCKELFLPKPAEGGNVTIASITLPVYSLKDRALQVIRCLVQ
PEDYRRLEIARCLHEELEDQPSVLKDLRRMNQRVEQHLLERIQGQEEEA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagagggtgagcagtctcttcccctggttcgctccctgaacagccgaatacag
atcaatgctttgttttgtaaccgcactccccgtgtggtgcgaccactatggataaattac
ctcgggaggcctcatccgtacgcagacatacagccagggaggacaaggagaatgacgacg
ttcgtcggccacccgtggatgttcagagatgcagagactgatgagccactaaaggtgaac
tgcaaagaactgtttcttcctaaaccagcagagggtggaaatgttactattgctagtatc
actttaccagtttacagcctcaaggatcgagctcttcaagttattcggtgtcttgtgcaa
ccagaagactacaggaggttggaaatagcgaggtgtctccatgaggagctggaggatcag
cccagtgtgctgaaagatctccgccgcatgaaccagcgggtagagcagcatctgctggaa
agaatccaaggccaggaggaagaggcatga
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