Lates calcarifer (barramundi perch): 108881484
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Entry
108881484 CDS
T04895
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108881484
03041 Spliceosome [BR:
lcf03041
]
108881484
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108881484
Spliceosome [BR:
lcf03041
]
Complex C
Other components
EJC/TREX
108881484
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
108881484
NCBI-ProteinID:
XP_018529035
UniProt:
A0A4W6EKW7
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Position
LG12:21810164..21814151
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AA seq
574 aa
AA seq
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MDKKKKPFDVTASSLVDLKAELYRKQEQFKQDKLGQENAGAGFKPKSKVKKPSVWNKQNA
GVSARAEKDAEQLAEEQRSLDTSKRKLEEKARLYEQMTKGDFPDEETEGLFLVDFTQKII
DKKRATLAQRDAEREEDDDGDSSTPIPAPQNPDEEWVDYVDALGRSRRCMKKDLPEFKKM
DQDLKGKGKVSSEKTLLSEDMRRELQRQEWEREEEEAMKRPVGPIHYEDIRGQEARELGV
GYFAFSHDEEQRRKQRDTLDMLRDQTTEQRSKRERLKEKRQAMLQARLAKVRQRKMKKSK
LDGTEEEQREEENEGQEEEDDLIGSPPPPEDAPEVSIVKKVEVEIQERRDTKPGVPHVRE
WDRGKEFMFSEWKTRCRDERDSEFAPPSAYFTDEKRQRPGMNKTQENKSKMSFKWTKGPG
GISESKEEPQPQPETTPSPPPPPPPPQQDHPAPPQPQTSSQPPPSNPPVVSAPVSAPPFH
PQYPPPLFYPPFPPPHPPQFAGPPHLPPHFPLQYPPHYPPQYLPQYTPQYPPQPQSQSQP
QQPAEPTDHNQAQQLPQGPSQSLDDMLSFYRNST
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaagaaacccttcgacgtgactgcttcgtcgttagtggaccttaaagct
gaactgtacaggaagcaggagcaattcaaacaggacaagcttgggcaagaaaatgctggt
gctggattcaaaccaaaatctaaagtgaagaaacccagtgtctggaacaaacaaaacgct
ggtgtttcagcaagggctgagaaagatgcagagcagctggccgaggagcagcgcagtctc
gatacatcaaaacgcaagttggaggagaaggccagactctacgagcagatgacaaaagga
gactttccagatgaagagacagagggtctgttcctggttgatttcactcagaagattatt
gacaaaaagagagcaacactcgcacagcgggatgcagagagagaggaggatgacgatgga
gacagctcaacacctatacccgctcctcaaaacccagacgaggaatgggtggactatgtg
gacgctttgggccgttctcgaagatgcatgaagaaagacctgccagaatttaagaaaatg
gaccaagatctgaaaggaaaaggaaaagtctcatctgagaagaccttactctcagaggac
atgcgtcgagagctgcagaggcaggagtgggagagggaggaggaggaggctatgaagagg
cctgttggacccatccactacgaggatatcagaggacaagaggctcgagaacttggtgtg
ggctactttgcattctcccatgatgaagagcagcgcagaaagcagagagacactctggac
atgctcagagaccagacaacagagcagcgcagtaaaagagaacggctgaaggagaagagg
caggctatgctgcaggcccggctggccaaggtgaggcagaggaagatgaagaaatccaag
ctggatggcactgaagaagagcagagagaagaggagaatgaaggacaggaagaggaggat
gatttgataggttccccgcctccaccagaggacgccccagaagtcagcatagtgaagaag
gtggaagtggagatccaggagaggagggacactaaaccaggagttcctcatgtcagagaa
tgggacagaggcaaagaattcatgtttagtgagtggaaaacgcggtgccgagatgagcga
gattctgaatttgcacctccctctgcatatttcaccgatgagaagagacaaagaccaggg
atgaataaaactcaggagaataaatccaaaatgtccttcaagtggacaaagggcccagga
ggaatctctgagagcaaagaggaaccacaacctcagcctgaaactactccttcaccacct
ccacctccacctccacctcaacaggatcatcctgctcctccacagccacagacctcatca
cagcctccaccctcaaacccgcctgttgtttcagctcccgtgtctgctcccccttttcat
cctcagtacccccctcctctattttatcccccatttcctcctccacatccccctcagttt
gcaggtccacctcacctgcctcctcacttccccctgcagtatcccccccactatccaccc
cagtatctcccacagtatacgccccagtatccacctcagccacagagccagtctcagcct
cagcagccggctgagcccacagaccacaaccaggcccagcagctccctcagggtccctct
cagagtctggatgacatgttgtccttctacaggaactctacctga
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