Lates calcarifer (barramundi perch): 108881494
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Entry
108881494 CDS
T04895
Symbol
gata2b
Name
(RefSeq) endothelial transcription factor GATA-2b
KO
K17894
GATA-binding protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108881494 (gata2b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
108881494 (gata2b)
SSDB
Ortholog
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GFIT
Motif
Pfam:
GATA
Zn_Ribbon_TF
DUF7573
Motif
Other DBs
NCBI-GeneID:
108881494
NCBI-ProteinID:
XP_018529051
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All DBs
Position
LG12:complement(21944079..21952791)
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AA seq
445 aa
AA seq
DB search
MDVTADQPRWMHHHAVLNGQHPDSHHHGLGHNYMEPTAQLLPPDEVDVFFNHLDSQGNPY
YHNSARARVSYSQAHARLTGSQVCRPHLIHSPGISWLESGKAALSAHHHNAWAVSPFSKP
SLHHPGSASPGGLSAVYPCSSNSNTVSASSLTPPTHSSPHLYTFPPTPPKDVSPDPGAVS
PSSSSATRMDEKESIKYQMSLTEGMKMEGTSPLRSSLASMSAQTPSTHHPIPTYPTYSLP
AAHEYGSSLFHPGSLLGASSNFNPKNKGKTRSCTEGRECVNCGATSTPLWRRDSTGHYLC
NACGLYHKMNGQNRPLIKPKRRLTTTTTLWRRNANGDPVCNACGLYYKLHNVNRPLTMKK
EGIQTRNRKMSNKSKKSKRVSDSYEEFSKSLHDKNSPFSAASLAGHMSMGHLPPFSHAGH
MLPTPTPIHPSFGHPHHSNMVTAMG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgacggccgatcagccccgctggatgcaccaccacgccgtgctgaacgggcaa
cacccggactctcaccaccacggcctgggccacaactacatggagcccacggcgcagctc
ctgcctccagatgaggtggatgttttctttaatcacctggactcgcaggggaacccgtac
taccacaactccgcccgggccagagtgtcctacagccaagcgcacgctcgtctgacgggg
tctcaggtctgccggcctcatctcatccacagcccggggatttcatggctggaaagtggg
aaagcagctctctcagctcaccaccacaacgcctgggccgtgagtcccttcagcaagccc
agcctgcaccacccgggctccgcgtccccgggcggcctatccgctgtctacccgtgcagc
agcaactcgaacacggtctccgcgtcgtcgttaacgccgccgacccactccagcccgcat
ctgtacaccttccccccgacgccgccgaaggacgtatcgccggacccgggggccgtgtct
ccctcgtcctcgtccgccaccagaatggacgagaaggaatctatcaaataccaaatgtca
ttaacggaggggatgaagatggagggaaccagcccgctgaggagcagcctggcctccatg
agcgctcagaccccctccacccaccatcccataccgacgtatcccacctactctctccca
gcggcacacgaatacggcagcagtctgtttcacccgggcagcctgctgggagcatcgtcc
aacttcaaccccaagaacaaaggcaagacacggtcctgcactgagggccgcgagtgtgta
aactgtggagccacctctacgcctctgtggagacgtgacagcaccggacactacctgtgc
aatgcctgcggactgtaccacaagatgaacggccagaacagaccactcatcaaacccaaa
cgcaggctgacgaccaccaccacgctctggcggcgcaatgcaaatggagacccggtgtgc
aacgcctgcggcctctactataaactgcataacgtgaaccggcctttgaccatgaaaaag
gagggaatacagacacgcaaccgtaaaatgtccaacaagtccaaaaagagcaagcgggtc
agcgacagctacgaggagttttccaaaagcctgcatgacaagaactctcccttcagcgcc
gcctccctggccggacacatgtccatgggccacttgccacctttcagccacgccggacac
atgctccctacacccaccccaatacacccgtcgtttggccacccgcaccactccaacatg
gtgacggccatgggttga
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