Lates calcarifer (barramundi perch): 108881496
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Entry
108881496 CDS
T04895
Name
(RefSeq) ras-related protein rab7
KO
K07897
Ras-related protein Rab-7A
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04137
Mitophagy - animal
lcf04140
Autophagy - animal
lcf04144
Endocytosis
lcf04145
Phagosome
lcf04148
Efferocytosis
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108881496
04145 Phagosome
108881496
04140 Autophagy - animal
108881496
04137 Mitophagy - animal
108881496
04148 Efferocytosis
108881496
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108881496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108881496
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcf04147
]
108881496
04031 GTP-binding proteins [BR:
lcf04031
]
108881496
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
108881496
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108881496
Exosomal proteins of other body fluids (saliva and urine)
108881496
Exosomal proteins of colorectal cancer cells
108881496
Exosomal proteins of bladder cancer cells
108881496
GTP-binding proteins [BR:
lcf04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
108881496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
ATP_bind_1
cobW
PduV-EutP
nSTAND3
Septin
AAA_16
AAA_7
NTPase_1
AAA_22
AAA_24
G-alpha
AAA_5
ATPase_2
NACHT
AAA_14
NB-ARC
SRPRB
ABC_tran
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
108881496
NCBI-ProteinID:
XP_018529053
UniProt:
A0A4W6EIR2
LinkDB
All DBs
Position
LG12:21974244..21983258
Genome browser
AA seq
207 aa
AA seq
DB search
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNDRAKPSPESCSC
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgacatccaggaagaaagtgctcttgaaagtcatcatcctgggcgattccggtgttgga
aagacctccctaatgaaccagtacgtgaacaagaagtttagtaaccagtacaaagctaca
ataggagcagacttcctgaccaaggaggtgatggtggacgaccggctcgttacaatgcag
atctgggacacggccggccaggagaggttccagtctttgggtgttgcattctaccgtggg
gctgactgctgtgtactggtgtttgatgtgaccgcacccaataccttcaagacactcgac
agctggagggatgagtttctgatccaggccagccctcgagatcctgagaactttcccttt
gtggtgctcggcaacaagattgacttggagaatagacaggtaaccaccaaaagggctcag
gcttggtgtcagagtaagaacaacatcccctactttgagaccagcgccaaagaagccata
aatgtagaacaggcattccagacaattgcacgtaacgccctcaaacaggagacagaggtc
gagttgtataatgaattcccagaaccaataaaactggataggaacgacagagctaaacct
tcaccagaaagctgcagctgctaa
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