KEGG   Lates calcarifer (barramundi perch): 108881496
Entry
108881496         CDS       T04895                                 
Name
(RefSeq) ras-related protein rab7
  KO
K07897  Ras-related protein Rab-7A
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04137  Mitophagy - animal
lcf04140  Autophagy - animal
lcf04144  Endocytosis
lcf04145  Phagosome
lcf04148  Efferocytosis
lcf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108881496
   04145 Phagosome
    108881496
   04140 Autophagy - animal
    108881496
   04137 Mitophagy - animal
    108881496
   04148 Efferocytosis
    108881496
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108881496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108881496
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lcf04147]
    108881496
   04031 GTP-binding proteins [BR:lcf04031]
    108881496
Membrane trafficking [BR:lcf04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    108881496
Exosome [BR:lcf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108881496
  Exosomal proteins of other body fluids (saliva and urine)
   108881496
  Exosomal proteins of colorectal cancer cells
   108881496
  Exosomal proteins of bladder cancer cells
   108881496
GTP-binding proteins [BR:lcf04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    108881496
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 AAA_7 NTPase_1 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT AAA_14 NB-ARC SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 108881496
NCBI-ProteinID: XP_018529053
UniProt: A0A4W6EIR2
LinkDB
Position
LG12:21974244..21983258
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNDRAKPSPESCSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacatccaggaagaaagtgctcttgaaagtcatcatcctgggcgattccggtgttgga
aagacctccctaatgaaccagtacgtgaacaagaagtttagtaaccagtacaaagctaca
ataggagcagacttcctgaccaaggaggtgatggtggacgaccggctcgttacaatgcag
atctgggacacggccggccaggagaggttccagtctttgggtgttgcattctaccgtggg
gctgactgctgtgtactggtgtttgatgtgaccgcacccaataccttcaagacactcgac
agctggagggatgagtttctgatccaggccagccctcgagatcctgagaactttcccttt
gtggtgctcggcaacaagattgacttggagaatagacaggtaaccaccaaaagggctcag
gcttggtgtcagagtaagaacaacatcccctactttgagaccagcgccaaagaagccata
aatgtagaacaggcattccagacaattgcacgtaacgccctcaaacaggagacagaggtc
gagttgtataatgaattcccagaaccaataaaactggataggaacgacagagctaaacct
tcaccagaaagctgcagctgctaa

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