Lates calcarifer (barramundi perch): 108881499
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Entry
108881499 CDS
T04895
Symbol
si:dkey-197j19.6
Name
(RefSeq) actin nucleation-promoting factor WASL isoform X1
KO
K23612
neural Wiskott-Aldrich syndrome protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
lcf04520
Adherens junction
lcf04810
Regulation of actin cytoskeleton
lcf05100
Bacterial invasion of epithelial cells
lcf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108881499 (si:dkey-197j19.6)
09144 Cellular community - eukaryotes
04520 Adherens junction
108881499 (si:dkey-197j19.6)
09142 Cell motility
04810 Regulation of actin cytoskeleton
108881499 (si:dkey-197j19.6)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
108881499 (si:dkey-197j19.6)
05100 Bacterial invasion of epithelial cells
108881499 (si:dkey-197j19.6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108881499 (si:dkey-197j19.6)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108881499 (si:dkey-197j19.6)
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108881499 (si:dkey-197j19.6)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
108881499 (si:dkey-197j19.6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
Motif
Other DBs
NCBI-GeneID:
108881499
NCBI-ProteinID:
XP_018529061
UniProt:
A0AAJ7LQX3
LinkDB
All DBs
Position
LG12:complement(22026208..22030323)
Genome browser
AA seq
344 aa
AA seq
DB search
MASSLVPGCHVMSDLLTIRERGILFTLLEPQCKLLKTTVAQVLEAKDTQGESPGWGYLGC
GVVCLIEDESVHSYFLRLYCVKRAKLLWEQEVYIPFKYTATRMFFHTFPADSHQIGFNFA
NQTEAEEFYLTVKAVQRKQENMTDMIKMTDTAADTSTSDPPDSGMKPVEHLDMDEQFPLD
APSSTVTPATSSFQDLDPAMRRLLMQAKLPVEDLKDKDIAEAVDCIINKFGGIKAVQREL
RNKGPVSQTLPRAAGASISIALKKRPLPPVPPIKGNTTSRQTPQHSDGVNLCLIPPPPPT
LAPADPERIRKSASFKHVGFSADPERGDLILNALREAFLQKQLQ
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtctggttcctggatgtcatgtaatgagtgatctcctgacgatccgtgag
agaggcatcctcttcactctgctcgaacctcagtgtaagctgctcaaaactacagtagca
caggtactagaggccaaagacacccagggtgagagtccaggctggggttatttaggctgt
ggcgtggtgtgtctcattgaggatgagtctgttcactcttacttcctgcgtctctactgt
gtcaagcgtgccaagttactgtgggagcaggaggtgtacatcccattcaaatacactgca
actcgcatgttcttccatacctttcctgcagatagccaccagataggtttcaactttgca
aatcagacagaggcagaggaattctatcttacagtgaaggctgtccaacgaaagcaagaa
aacatgactgacatgattaagatgacagacactgcagcagacacctcaacaagtgaccca
cctgactcaggaatgaaaccagtggaacatttggacatggacgagcagttccctttggat
gcaccatcctctactgttacaccagccaccagttcatttcaggatctggatcccgctatg
agaagactcttgatgcaggcaaaactccctgtggaagacctgaaagacaaggacattgct
gaagctgttgactgcatcatcaacaaatttggaggaataaaggctgtgcagagagagttg
aggaacaaaggcccagtctcccagacattgccaagagctgcaggggcatccatctccata
gctctaaagaaaaggcctttgccaccggtccctcctatcaaaggcaacaccacctcccga
cagacaccacagcactcagatggagtaaacctgtgtctgattcctcctcctccgcctaca
ctagctccagctgatccagagagaatcagaaagagtgcaagtttcaaacatgtgggcttc
tcagcagatccagaaagaggtgacctcatcctaaatgcactgagagaagcgttcttacaa
aagcagctccagtga
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integrated database retrieval system
