Lates calcarifer (barramundi perch): 108881503
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Entry
108881503 CDS
T04895
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108881503 (sox21b)
Transcription factors [BR:
lcf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
108881503 (sox21b)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
108881503
NCBI-ProteinID:
XP_018529065
UniProt:
A0A4W6FYB2
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Position
LG1:complement(16979015..16981310)
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AA seq
248 aa
AA seq
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MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLSAGALSESV
IGNPDKAAAAAAAAAARVFFNPSMSTNPYSFFDLGSKMTELSPPSFPYASPLGYPPGGAT
AFTGTGSVGGGTHTHTHSHPSPGNPGYMIPCNCTAWPSAGLQPPLAYILLPGMGKPQLEP
YPAYAAAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgcccgatgaatgccttcatggtttggtccaga
gcccagcgcagaaaaatggctcaggagaaccccaaaatgcacaactccgagatcagcaag
agactgggagcggagtggaaacttctcaccgagtcagagaaaaggccattcatcgacgaa
gccaaacgactgcgagcgatgcacatgaaggaacacccagactataaatacagaccgagg
cggaagcccaagactctgatgaaaaaagataagttttctttccccgtgccctacaatctc
ggggagcacgacgcacttaaagttaacgggctttctgctggagcactttccgagtccgtc
attgggaaccccgataaggcggcggcggccgcggcggccgcagcggcgagggtgttcttc
aacccgtccatgtccacgaacccctattcctttttcgacctgggatccaagatgaccgag
ctttccccgccttcgtttccgtacgcgtctccgctgggctacccgccgggaggcgccacg
gctttcaccgggactggcagtgtaggtggcgggacgcacacccacactcactcacatccg
tcccctggaaacccgggctacatgatcccttgtaactgtacggcctggccctcagcagga
ctccagcctcccttagcgtacattctcctccccgggatgggaaaacctcaacttgaaccg
taccctgcatatgctgcggcattatga
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integrated database retrieval system
