Lates calcarifer (barramundi perch): 108881508
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Entry
108881508 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: dnaJ homolog subfamily C member 3a
KO
K09523
DnaJ homolog subfamily C member 3
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108881508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
lcf03110
]
108881508
Chaperones and folding catalysts [BR:
lcf03110
]
Heat shock proteins
HSP40 / DNAJ
108881508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_16
TPR_14
DnaJ
TPR_11
TPR_9
TPR_17
ANAPC3
TPR_12
TPR_CcmH_CycH
TPR_6
TPR_20
TPR_Slam
TPR_21
BTAD
ARM_TT21_5th
Fis1_TPR_C
TPR_10
ARM_TT21
Alkyl_sulf_dimr
COG4_N
TPR-S
TPR_4
ATPD_C_fung
Consortin_N
DUF4363
RPN7
Motif
Other DBs
NCBI-GeneID:
108881508
NCBI-ProteinID:
XP_018529074
UniProt:
A0AAJ7PK98
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Position
LG1:17053057..17063476
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AA seq
503 aa
AA seq
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MVSIDHVTHKILTYIPYVLVLIDMRYEGVKCGRDGSVDNHMEMGKKLLAAGQLADALSHF
HAAVDGDPKNYLAYYRRATVFLAMGKSKSALPDLSRVIELKPDFTSARLQRGNLLLKQGR
LDEAESDFKKVLKSNPSDKEEREAQSQLTKSDEIQRLVAEAHSSFSSQDYVTAAAQLDTV
IETCVWDVTSREMRAECFIQIGEMGKAISDLKAASKLKNDNTQAFYKLSTIYYNLGDHEM
SLNEVRECLKLDPDHKQCYSHYKQVKKLNKQIQSAEELIQEQRYEEAVNKYEAVMKTEPK
VHHFTLLAKERICHALAQSQQASRAVSVCSEVLQSDPENVNVLKDRAEAYVQEEQYEEAI
KDYETAAKHSENDRQIKEGLEKTQRLLKQSQKRDYYKILGVKRTAQKKEIIRAYRKLAQQ
WHPDNFQDPEEKKKAEKKFIDIAQAKEVLTDPEMRTKFDHGEDPMDPESQQGHHHHHFHG
GFHGFQGFNPFGSGPFNFKFNFN
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtttccattgaccatgtaactcacaaaatactgacttacatcccatatgttcttgtt
ttgattgacatgagatatgaaggggtgaaatgcggaagggatgggagcgtggacaatcat
atggagatggggaagaaactgctcgctgctggccagctagccgatgccctctctcatttc
catgccgctgtagacggagaccccaagaactacttggcctactacaggagagctacagtg
tttctggcaatggggaagtcaaagtctgcgctgccagacttgagcagagtcattgagctc
aaaccggacttcacgtctgcacgacttcagagaggaaacctccttctgaagcagggaaga
cttgatgaagcagagagtgacttcaagaaggtgctgaagtccaaccccagcgacaaagaa
gagagagaagcccagagtcagctgacaaagtcagatgaaattcagcggctggtggctgag
gcccacagcagcttcagcagccaggattatgtgacagctgctgcccagcttgacactgtc
attgagacttgtgtttgggatgtaacttcgcgtgagatgcgagcagagtgttttatccag
attggagagatggggaaggccatcagtgaccttaaagctgcatccaagttaaagaatgac
aatacacaggctttctacaaactcagcaccatctactataaccttggagaccatgagatg
tccctcaatgaagtgcgtgagtgcctgaagctggatcctgatcacaagcagtgttacagc
cattacaagcaggtcaagaagctcaacaaacagatccagtctgcagaggagctcatccaa
gagcagagatatgaagaagcagtgaacaaatacgaggcggtgatgaagactgaacccaag
gtgcaccatttcaccctccttgccaaggagcgcatctgccatgcgttggcacagagccag
caggccagcagagctgtgtcagtgtgtagtgaagtcctccagtcggacccggagaatgtt
aacgtgctgaaggacagagctgaggcctacgtccaagaggaacagtatgaggaagctatt
aaggactatgagactgctgccaaacacagtgagaatgaccgtcagataaaagaaggcctg
gagaaaactcagcgacttctcaaacagtctcagaagagggattattataagatccttgga
gtgaagagaactgcccagaaaaaggagattatcagagcctataggaaactggcacaacag
tggcatccggacaacttccaggatccagaggaaaagaagaaggctgagaagaagttcata
gacatcgctcaggctaaagaggttctcactgacccagagatgagaaccaagtttgaccac
ggggaggaccccatggatccagagagccagcagggtcaccaccatcatcacttccatgga
ggtttccacggcttccagggtttcaatccatttggttctggaccctttaactttaaattc
aacttcaactga
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