Lates calcarifer (barramundi perch): 108881605
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Entry
108881605 CDS
T04895
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108881605 (arhgef28a)
Membrane trafficking [BR:
lcf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
108881605 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
Ank_2
Prok-RING_1
SOS1_NGEF_PH
PH_13
RGCC
C1_2
PHD
Motif
Other DBs
NCBI-GeneID:
108881605
NCBI-ProteinID:
XP_018529210
UniProt:
A0AAJ7PKB4
LinkDB
All DBs
Position
LG9:complement(17017427..17058161)
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AA seq
1787 aa
AA seq
DB search
MEVDRREAPLYGQVEANIGLQASTPEDAEFYVVVQGSRLSHVTTAKRRDDGLTLCFTVPG
HDLVEVVSVTSYFYKEDQVKLCEGEAALEYLRDVAQEAAEYLSAHRDQLCPQSYQEVLKR
FPMWAWAADEGLSAGGSDRDEEDVQLSKSRCDEAGLRQLDERITQAMANMDYPQQWKNTD
SQSREAAEIQPKETLLHLAVRLGLVHLSRFLIHQPRGQRALTLPNQDGDTPLQLAQKDGQ
HAMFRVLAAPPGPVVGSAPGVCTVWSDSSCMLRFCPGTNSLTLTVRQAPGSCPQDAIMLL
RDRLVDHSILKLISMLRVDTEVDKRSRDEAFSNDEGISKELRVEEHVLVDNVFEEQLVLS
LDDDDDEEEYPSPLSVNGHPMKSSGVQFTQHAIDPLLSMINSNDQTVTQQPQADSVDLKY
SVTGVTRDSTGTDSSLWDTVDSQDLLLATDTPPPCSEENFFPHSEPCSPPPSPADQALAR
LNRPTSFEPTNERYSPPMDTCDLSPSLVALEVDSEEDSAEPKSPLSPLSLDVEKSEDKRE
AFCPSPDLTCTRSQSASSACEPTTKDLGDQGIRLRSYSYSSPKISLRPARFARDNHTSDI
SPDAVLHSVSHSRSLLQALSLSKSLSLLHPGKQRASSISEQSHEKREIRFRKRAQSADDE
GSMELAESLQHLTLSEFLKEIEEEELDKYNIPTKVESEKYKVIRTFSFLKSRMSSTRNKT
KGKGKEREAKDRQLNGHRFATGSCLGPNVCVVCDKAVSGKDLLHCPSCTAIIHKGCKESA
PPCLKKLQDKYAVAMVKNRTASLPQNFTVRDSPPQCVVPISTSLPVMAPKEKKDTMTQSC
SLSGSFPSTDSRLSESSETESDAMKTSSHSEEQLLTPMSSTSTDSSFGEDCVDAFIQSDI
SADAVDYEAESWSLAVEHKFCKRQEKRSVKRQDVIYELMQTELHHLQTLHIMAEVFRRGM
REEVQLDTEAVKRVFPCLDQLLLFHHAFFATMKERRRGSAQPQGHRNYLIQRIGDVLLQQ
FSDENGEKMKQVYGEFCSRHNEAVSFFKELQQHNKRFQNFIKQQGNNSLVRRREIPECIL
LVTQRITKYPVLLERILQYTQEETEEHADLSKALAQIREVIAAVDSRVSEYERHQRLQEV
WNRMENRSSAKLKNGHTFRKQDMMGPGQMLKHQGLLLWKTATGRLKDVLALLLTDTLIFL
QEKDQKYTFATVDQKPPVIALQKLIVREVANEERGMFLISASSAGPEMYEVHTSSKEERN
TWMRLIREAVESCPEEEEEYTSESEEEKRAAEARIHKIHKLQESLTSQDQQICSSLEEKL
QIYTELSALSGRATDTSAVEPRLLVQPHSEEPPQAAVLLAAALQEAENLKATLSSKARSP
SSHSPDSDTDSVFPVSPAALVEPPSDSSEPSPENPEASEGSWTEAVVLQSPTHLQKMDTD
DIDIKVAQSVQSLTQLLYSLQAAVTIQDSCYEVQRLLLRETGRPSPRAQRLHLPSVRGNT
LQEQEKQRNLEKQKEEVAAAQRLQDRLRLEKERWERECQARESQQGEQESRLEERERQCH
LEAERLRREREELDEQLEEYQQSLERLREGQRSVERERERLENQQKLLETWRHSRQRSLP
TVIPHMVIPLDGQQDPPPSQSRDHAGNGSMFVNEAAFASTSINNRHVHHKRNDPSAHNCL
NTLLARSNSRQPPAAKTPHNPHSDSQGWVMGTGHLYSPAGRLGLQHTPSDHNTHSYIRET
WSSTASGTDPYPEFPHPSDPRLDLSALVSLETDSGGEEGREETIVYL
NT seq
5364 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacagaagagaggcgcctctatatggacaggtggaggccaatatagggttg
caagcaagtactcctgaggatgcagagttttatgttgttgtacaaggttcaagactttca
catgtgactacagcaaaaagaagagatgatgggctgactctttgcttcacagttcctggc
catgacctggtggaagttgtctctgtcacatcctacttttacaaagaagaccaagtcaag
ttgtgtgagggtgaagcagctcttgaatacctcagggacgttgcccaggaagcagcagag
tatctgagtgcgcacagggaccagctctgccctcagagctaccaagaggtcctgaagagg
tttcccatgtgggcatgggcagctgatgaggggctctctgctggagggtcagaccgtgat
gaggaggatgtgcaactcagcaaaagtagatgcgatgaagcaggtctcaggcagctggat
gagaggatcacgcaggctatggccaacatggattaccctcaacagtggaaaaacactgac
agtcagtcaagagaagctgctgagattcagcccaaagaaaccctgcttcacctggcggtg
cgtttgggtttggtccatctctcccgtttcttaattcaccagccgagaggtcaaagggcg
ttgaccttacccaatcaggatggagacacaccccttcagctggctcagaaggatggacag
cacgccatgttcagagtgctggcagctcctccaggtcctgtcgtcggctccgccccaggt
gtgtgtaccgtgtggtccgacagctcctgcatgctgagattttgtcccgggacaaactct
ctgaccctgactgtgcgacaggctcctggcagctgccctcaggacgccatcatgctccta
cgagacagactggtagatcacagcatcctcaaactgatcagtatgctcagagttgatacc
gaggtggacaagagaagcagagatgaagccttttctaatgatgaaggcattagcaaggag
ctgcgagtggaagagcacgtgctggtggacaacgtttttgaggaacagcttgttctgtct
ttggatgatgacgatgacgaagaagagtacccatccccattatctgtaaatgggcatccc
atgaagtccagtggagtccagttcacccagcatgctatagaccctctgctctccatgatc
aacagcaacgatcagacggtcacacagcagccacaggcggacagtgttgacctcaagtac
agcgtcactggagtgacaagggacagcacggggacagacagcagtttatgggacacggtg
gactcgcaagatctcctgctagccaccgacactcctccgccctgttcagaggaaaacttc
ttcccccactctgagccctgctctccgcctccctcacccgctgaccaggccctcgccagg
ctgaaccgtcccacctcatttgagccgaccaatgagagatacagtccgcccatggacacc
tgcgacctcagccccagtctagtggccctggaagtggacagtgaagaggacagtgccgag
ccaaagtctccgctgtccccactctcgttagatgttgagaaaagtgaagacaaaagggaa
gccttttgtccgtcgcccgaccttacttgcactcgcagccagtctgcctcttcagcatgt
gaacccaccacaaaagatttgggtgaccaggggattcgactgcgttcctattcctactcc
tcccccaaaatcagtctgcgacctgctcgttttgcccgggataatcacacatcagatatt
agccctgatgccgtgctccacagtgtcagccacagccgatctctccttcaggccctctct
ctgtctaaatctctgtctctgctccaccctggtaagcaaagagcctccagtatttcagag
cagtcacatgagaaaagggagattaggttccgtaaacgtgcccagtctgctgatgacgag
ggcagcatggagctggcagagtccctccagcatctcacactgtctgagttcctcaaagaa
attgaagaagaggagttggataagtacaacatccccaccaaggtggagtcagagaagtac
aaagtcattcgaaccttcagttttctcaagagcaggatgtccagtacacgcaacaaaacc
aaggggaaggggaaggaaagagaagccaaggataggcagctgaatggacatcggtttgca
acagggtcctgtttaggccccaatgtgtgtgtggtgtgtgacaaagcggtatctggaaag
gacctgctgcattgccccagttgtactgccatcatccataagggctgtaaagaatctgct
cccccatgtttgaagaaacttcaggataaatatgccgttgccatggtgaagaacaggaca
gcatctctcccacagaatttcacagtgagagacagtcctcctcagtgtgtggtccccatc
tctacctctctacctgtcatggccccaaaggagaaaaaggacactatgacccagtcatgc
tctctctctggaagtttccccagcactgacagtcggctcagtgagagttcagagacagag
tctgatgccatgaagacaagcagccattcagaagagcagctgctgactccgatgtcctcc
acctccacagactcatcatttggagaagactgtgtggacgcgtttatccaaagtgacatc
tcggccgatgctgtggattacgaggcggagtcgtggagtctggcagtagagcacaagttc
tgcaagaggcaggaaaaacgatctgtcaagaggcaggatgttatctatgagctgatgcag
actgagcttcaccacctgcagacgctacacatcatggcggaggttttccggcgaggtatg
agggaggaagttcagctagatacagaagcggtgaagcgggtcttcccctgtctggatcag
ctgctcttattccaccacgccttcttcgccaccatgaaggagcggcgacgcggctcggcc
cagccccagggacacaggaactacctcatccagagaataggagacgtcctgctccaacag
ttttcagatgagaacggcgagaaaatgaagcaggtgtatggagaattctgcagtcgtcat
aatgaggcggtcagcttcttcaaagagctccagcagcataacaagagatttcagaacttc
attaagcaacaaggtaataattccttggtgagacggagggagatcccagagtgcatcttg
ctggtaacccaaaggattacgaagtacccagtgctgctggagaggatcctccagtatact
caagaagagacggaggagcatgcagatctttcaaaagccctggctcagatccgggaggtg
atagcagccgtggactcacgggtcagtgaatatgagcggcatcagagattacaggaagtg
tggaaccgcatggagaatcgcagctcggccaagctcaagaacggacacaccttccgcaag
caggacatgatggggccgggacagatgctcaaacaccagggcctgctcctgtggaagact
gccactggtcgactgaaagatgtcctggcgctccttctaacagacacactcatcttccta
caagaaaaagaccagaagtatacatttgccactgtggaccagaaacctccagtcatcgca
ctgcagaagttaatagtgcgagaagtagcaaatgaagagagagggatgtttttgatcagc
gcgtcatccgccggccctgagatgtacgaggttcacacgtcatctaaagaggaacggaac
acttggatgaggctcattagagaggctgtggagagctgtccagaggaagaagaagagtac
acaagtgaatctgaagaggagaagcgagctgctgaggctcgcattcacaagatccataag
ttacaagagagtctgacgagccaggaccagcagatctgctccagcctggaggagaagctg
cagatttacacggagctctctgctctgagtgggagggcgacagacacgtcggcggtcgaa
ccgcgactgctcgtccagccgcattcagaggagccgccccaggccgccgtgctgctggct
gcagctctgcaagaggctgaaaaccttaaagccacgttgtcgtccaaggcccgctctcca
tccagtcacagcccggactcggacacagactctgtgtttcctgtcagccctgctgcactt
gtagagcccccctccgattcttcggagccctcacctgaaaaccctgaggccagtgagggg
agttggactgaggcggtagtccttcagtccccgactcacttgcaaaaaatggacacagat
gacattgatattaaggttgctcaaagtgtccaaagcctgacccagttactctacagtctg
caggctgcggtgaccatccaggacagctgctacgaggtccagaggctcctcctccgagag
accggacgcccctctccacgcgctcagagacttcacctcccgagcgtccgcggcaacacc
ctgcaagagcaggagaagcagcgcaacctggagaagcagaaggaggaggtggcggcggct
cagcggctccaggaccgactgcgcctggagaaggagcgctgggagcgggagtgccaggcc
agggagagccagcagggggagcaggaaagcaggctggaggagagggagaggcagtgccac
ctggaggccgagaggctgaggcgggagagggaagagctggacgagcaactggaggagtac
cagcagagcctggagcggctcagggagggccagaggagcgtggagagggagcgcgagcgc
ctggagaaccaacaaaagcttcttgagacctggaggcacagccggcagaggagcctgccc
actgtgattcctcacatggtcatacctctagatggtcagcaggacccaccaccaagtcag
tcaagagaccatgcaggtaacggctccatgtttgtgaatgaggcagcgttcgccagcacc
agcatcaataaccgtcacgtccaccacaaaagaaatgaccccagcgcacacaactgtctc
aacaccctgctggccagatccaacagcagacagccccccgcagctaagaccccccataat
ccacactcagactcccaaggatgggtgatggggacagggcacctctacagccctgcagga
aggctggggctgcagcacacacccagtgatcataacactcacagctacatcagggagacc
tggtcgtcaacagcaagtggaactgatccgtacccagagttcccgcatcccagtgaccct
cggctggacctcagtgcactggtttccttggagactgacagcggtggggaggagggcagg
gaggaaaccattgtgtacctctga
DBGET
integrated database retrieval system
