Lates calcarifer (barramundi perch): 108881640
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Entry
108881640 CDS
T04895
Symbol
sh2d3cb
Name
(RefSeq) SH2 domain containing 3Cb isoform X1
KO
K23690
SH2 domain-containing protein 3C
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108881640 (sh2d3cb)
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
108881640 (sh2d3cb)
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Gene cluster
GFIT
Motif
Pfam:
SH2
RasGEF
DUF7145
Ribosomal_60s
Motif
Other DBs
NCBI-GeneID:
108881640
NCBI-ProteinID:
XP_018529219
UniProt:
A0AAJ7LR55
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Position
LG13:26037021..26061865
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AA seq
883 aa
AA seq
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MSKRKLSLKWLGSLTNIAIRRTPEKANIKAVPEHDGSLCGVKSASVGDQSVDDMESCPQS
PGYARSSDMYTHVGTIPRSERQKKSCKGLKEKKKKEEKEEEEEEEEEGVSGGQSQWKAGE
HVRDSPLLSALSSLSLTSLDRPLPRPLPSTPTPSRASPLTSAPQSCLRDPSGDLIKNQEA
LSGSQDALETARLVKSLSNMATNGPKVVSAQDLYVPMDPITEATRNHVDDQKDRQRRITQ
ETKNHVNVMQEVAGLDSQHDVADSSGEYVKFSKEKFWLEPPSETQRKQLEEELKLSGTNL
KSHAWYHGHIPWEVSESLVLNHGDFLIRDSQSSQGDFVLTSHWEQKTLHFLIRKSVVQSS
ETYTRVRYSLEGEAFDSLPALVHFYVGSRAVLTRWSGAQIHRPVNRTLPLSYLETAFCTA
VSTGGEARVCPRSPSSLHHREADVNSEQDEQTLLTAGESFLSPPYSNNTPQSRSPCSSRA
ASVAPSPALSRRSDTTQSTQPSPNSTLHRQYNNISQPHLNQDSPSSETDGSCYTELYPGP
QSYVERLRVEEVSVGVDPLRVEDGNVHFSPVVETVSSFKPSRYQSPLMPKENKPLEVGIL
RRVKELLAEIDPRTAAKHITKADCMVARILEVTPEVQRMMGVHSGMELLTLPHGQQLRLD
LLERFQTMAIMLAVDVLGCTGTTEERAGLLHKIIQIAAELKSTMGNMFGFAAVMRALELP
QVSRLEQTWMALRQRHTEGAILYEKTLRPFMKSLNDGRESCPLSNTTFPHVLPLLSLLEK
SVAVGEGTEPWETVEVGVDVVMFHLGAARTIAQLGGIYRSNAESKLQGFQEQAEVLELFL
TDFQMRLLWGSRGATENQALRYSKFDQVLTALSNKLEPPVRSQ
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgaaaactgagtctaaagtggctcgggagcctcaccaatatcgccatccgc
cgcacgccagagaaggccaacatcaaggcagtcccagagcatgatgggagcctctgtggt
gtcaaatcggcatcggtgggggaccagtcggtggatgacatggagtcctgcccccagagc
cccggctacgcccgctccagcgacatgtacactcatgtgggcaccataccccgcagcgag
aggcagaagaagagctgcaaggggctgaaggagaagaagaagaaagaggagaaggaggag
gaggaggaggaggaggaggagggggtgagtggagggcagagccagtggaaggcgggggaa
cacgtccgagactcccccctgctcagcgccctgtccagcctcagtttgaccagtctggac
cggcctctgcctcggccgctgcccagcaccccgacacccagccgggcttcacctttgacc
tcagcgcctcaaagctgcctcagagatccttcaggagacctcattaaaaaccaagaggcg
ctgtcagggagccaggatgctttagaaactgctcgacttgtaaagagtctgtcaaacatg
gcgactaacggccccaaagtggtttcagctcaggatctgtacgtgcccatggacccgatc
actgaagcaactcgcaaccacgtggacgaccagaaagacaggcagcggagaataacacag
gaaaccaaaaaccacgtgaatgtcatgcaggaagtggcgggtcttgacagccagcacgac
gtggcagacagcagcggagaatatgtgaagttctccaaagagaagttctggttggagccg
ccgtcagagacacagaggaagcagctggaggaggagctgaagctgagcggcacgaacctg
aagagccacgcctggtaccacggacacatcccctgggaggtgtcagagagcctggtgttg
aaccacggagacttcctcatcagagactctcagtccagtcagggcgacttcgtcctcacc
agtcactgggagcagaaaacacttcacttcctcatcaggaagtcagtggttcagtccagt
gagacgtacacccgggtccggtacagcctggagggcgaggcctttgactccttaccggcc
cttgttcacttctatgtgggcagcagggcggttctgacccggtggagcggggctcagatt
caccggcctgtgaacaggacgctgccgctcagctacctggagacggccttctgcaccgcc
gtcagcacgggtggagaggcgagggtctgtccgaggagtccgtcctcgctccaccacagg
gaggcagatgttaacagtgaacaggacgaacagactctgctgactgctggagaatccttt
ctctctcctccctacagcaacaacaccccacagtcaagaagcccttgcagtagccgtgca
gccagcgtggctccatccccggccctctccaggcgctcggatacaacccaatccacccaa
ccctccccgaacagcaccctccacagacagtataacaacatatcccagcctcatctgaac
caggactccccttcttctgaaactgatggaagctgctacacagagctgtaccccggccct
cagagctacgtggagaggctgcgggtggaggaagtgtcagtgggcgtcgatccactgagg
gtggaggatgggaatgtgcacttctcaccagtggtggagacggtttcttctttcaaaccg
agcaggtaccagtcgccgctaatgcccaaggagaataagcctctggaggtgggcattctg
cggagggtgaaggagcttctggccgagatcgaccccaggacggcagccaaacatatcacc
aaggctgactgcatggtggccagaattctggaggtgactccagaggtgcaaaggatgatg
ggagttcactctgggatggagctgctcacgttgccacatggacaacagctgagactggat
ctgctggagaggtttcagaccatggcgatcatgttggctgtggatgtgttgggctgcaca
gggacgactgaggagcgagccggtctgcttcataaaatcatccaaatcgctgctgagctc
aagagcaccatgggcaacatgttcggcttcgctgccgtcatgagagccttggagctgccg
caggtgtcccgtctggagcagacctggatggcgttacggcagcgacacacagagggcgcc
attctctacgagaaaactctgaggccgttcatgaagagcctgaacgacgggagagaaagc
tgtcctctgtccaacaccaccttcccccacgtcctccccctcctgtctctgctggagaag
agtgtggcggtgggtgaggggacagagccgtgggagacggtggaagttggcgtggatgtg
gtcatgttccacctgggagcggcgaggaccatcgcacagctggggggcatctaccggtcc
aacgctgagagcaaactgcaaggtttccaggagcaggccgaggtcctggagctcttcctg
actgacttccagatgaggctgctgtgggggagcaggggagccacggagaaccaggctctg
cgatactccaagtttgaccaggtgctgacagccttgtccaacaagctggagcctcctgtc
agatcgcagtga
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