Lates calcarifer (barramundi perch): 108881655
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Entry
108881655 CDS
T04895
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108881655
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
108881655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
EIF3I
WDR55
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR19_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
NBCH_WD40
HIRA_B
Mcl1_mid
Beta-prop_EIPR1
WD40_like
Motif
Other DBs
NCBI-GeneID:
108881655
NCBI-ProteinID:
XP_018529242
UniProt:
A0AAJ7LQ41
LinkDB
All DBs
Position
LG13:26188415..26203474
Genome browser
AA seq
1017 aa
AA seq
DB search
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREEDEKNENIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWRRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTVDWQMEANITKPFSECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD
ELGDPLSEEEKNSIHQNIYGKSLAITSTEAQLSTTIIENPEMLKYQQERQNSAQANSGPG
SAGPESSTPKLNSVMNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPAL
FNSVPILPSGSSMSSQLIPQLSSDSSPGQASSLGLRPSHDLTSPPASGTAKGLEDNKDGV
KPSLLLTSAPKIEPMKALDSRFTERSKATPGVTAAISSTAGLTPLDRPKDGISALKDVKT
KEDTSSDSEDKMAAINKNLAFGKRKPELLMDGGEVVEKRKKGRPRKDKMAATIAQPFTQI
TPPAEREPSRAAAPPAPVAVLKLPTPSTQKAFTLQVSMEPSVFLEVENEVSVVAGSKLSQ
LRCSRDGRDWNTLLPSSVVTAAGSSDILAVACEDRMLSVFSSCGRRLLPAIQLGTPVSAL
HCSAHFLMALTAGATLSVWDVQKQKALVKNESLLTILPGADITVSQSLLTQQGVPVIGLS
NGKSYCFSSSLETWTLIADKGDSLVQCADFRSCLPTHDAPVSSGPLAVMQGRNLSAGRLA
SRLSSTPHHLQQSMTLAFLENQLASALTLQSAQEYRYWLLIYARFLVNEGSEYRLRELCK
ELLGPVHKSAATAWEPTTLGLRKRELLREVLPVIGENLRFQRLFTEYQDQLELLRNK
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgagctgggtgagccacaacggcaaacccatattttctgttgat
attcaccctgatgggacaaagtttgcaactggtgggcaaggagaggattctggaaaggtg
atgatatggaacatggcaccagtcctccgagaggaggacgagaagaacgagaatattccc
aaaatgctttgccagatggacaatcacctagcgtgtgtgaactgtgtgcgctggtccaac
aacgggctgtacctggcatcaggaggagacgacaagctggtcatggtgtggaggagagct
gcattcatcggtccgagcacggtgtttgggtcgagcagtaaactggccaatgtggagcag
tggaggtgtgtcaccatcctgaggaatcacactggagatgtgatggacgtggcgtggtct
cctcatgacgtgtggctggcctcctgcagcgtcgacaacaccatcgtgatctggaacgct
cgcaaattcccagagatggtaacatgtctgcgaggacacactgggctggttaaaggtctg
acgtgggacccagtagggaaatacatcgcctcccaggccgacgaccacagcctcaaagtg
tggaggacggtggactggcagatggaggccaacatcaccaaacccttcagcgagtgcggc
gggacgacccacgtcctacgtctgtcctggtctccagacggtcagtatctggtctccgct
cacgccatgaacaactcaggccccaccgctcagatcgtagagagagacggctggaagact
aacatggactttgtgggccaccgtaaagccgtcactgtggtgaaattcaacccaaagatc
tttaagaagaagcagaagaacggcagctctccaaagcccagctgtccatactgctgctgc
gctgttggcagcaaagaccgatcgctctctgtctggctgacctcactgaagcgccctctg
gtggtcattcatgatctttttgataaatcaattatggacatctcctggactctgacaggt
ctggggatgcttgtgtgttcgatggacggcactgttgcctacctggacttctcactggat
gaactgggggacccgctgagcgaggaggagaagaatagtatccaccagaacatctatggt
aagagtctggctataaccagcactgaggctcagctctccaccaccatcatcgagaacccc
gagatgctcaaataccagcaggagcgacagaactcggcccaggccaactcaggaccaggc
agcgccgggcccgaatcctctacccccaaactcaacagtgtgatgaacggagagtctctg
gaggatatcaggaagaaccttctgaaaaagcaagtggagacgagaaccgcagacggtaga
agacgaatcacaccgctgtgtatcgctcagctggacacaggggatttctcgccggcgctg
ttcaacagcgttcccatcctgccctcgggctcctccatgtccagtcagctcatccctcag
ctcagctctgactccagcccaggacaggcctcctctctggggctgaggcccagccatgac
ctcacctcacctccagccagcggcaccgccaagggcctggaagacaacaaggatggtgtg
aaacccagtctgctgctcacctctgctcccaagatcgagccaatgaaagctttggactcc
aggtttacagagaggtcgaaggccacgccgggggtcacagccgccatctcctccaccgct
ggactcactcctcttgacaggccaaaagacggcatctcggccctgaaagacgtaaaaacc
aaagaagacaccagcagcgacagcgaggacaagatggctgccatcaacaaaaacctggcc
tttggcaagaggaaaccagagctgctgatggatggaggagaggtggtggagaagaggaag
aagggacggcccaggaaagacaagatggcagctaccatcgcccaaccctttacacagata
actcctccagcagagcgggagcccagcagggcggcagctcctccagctcccgtcgccgtt
ctcaaactaccaacaccaagtacacagaaggccttcactctgcaggtgagcatggagccg
tcagtgttcctggaggtggagaatgaagtgtcagtggtcgcgggttcgaagctcagccag
ctgcgatgctccagagacggacgagactggaacacgctgctgcccagctcagtggtcact
gctgcagggagcagtgacatcctcgccgtcgcctgtgaggacaggatgttgtcagtgttt
tcttcctgtgggcggcggctccttcctgccatccagctcgggacaccggtgtcagctctg
cactgctcggcccacttcctcatggctctgactgcaggagcgacgctgtccgtctgggac
gttcagaaacagaaagctctggtgaagaacgagtctctgctgaccattttacctggtgct
gacatcacagtgtctcagtctctgctgactcagcagggagttccagtcattggactgtcc
aatgggaagtcgtactgcttcagctcctccctggagacctggactctgatagcagataaa
ggagactctctggtccagtgtgctgacttcaggagctgcctacctacccatgatgcacct
gtgtcttcagggccgctggctgtaatgcagggacgcaacctcagtgctggtcggctggcg
tcccgcctctcctccacccctcaccacctgcagcagagcatgacgttggccttcctggag
aaccagctggcgtctgctctgactctgcagtcggcgcaggagtatcgttactggctgctc
atctacgcccgtttccttgtcaacgaaggctcagagtatcgtctcagagagctctgtaag
gagctgctgggtcccgtccacaaatctgcagccacagcctgggagcccaccactctgggt
cttcgtaagcgggagttgctgcgggaggttttacccgtcattggtgaaaacctgcgattc
cagagactgttcactgaataccaggaccagctggagctgcttcgcaacaaataa
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integrated database retrieval system