KEGG   Lates calcarifer (barramundi perch): 108881655
Entry
108881655         CDS       T04895                                 
Name
(RefSeq) protein HIRA
  KO
K11293  protein HIRA/HIR1
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lcf03036]
    108881655
Chromosome and associated proteins [BR:lcf03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    Other Histone chaperones and regulators
     108881655
SSDB
Motif
Pfam: Hira Beta-prop_CAF1B_HIR1 WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N EIF3I WDR55 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_WDR19_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 HIRA_B Mcl1_mid Beta-prop_EIPR1 WD40_like
Other DBs
NCBI-GeneID: 108881655
NCBI-ProteinID: XP_018529242
UniProt: A0AAJ7LQ41
LinkDB
Position
LG13:26188415..26203474
AA seq 1017 aa
MKLLKPSWVSHNGKPIFSVDIHPDGTKFATGGQGEDSGKVMIWNMAPVLREEDEKNENIP
KMLCQMDNHLACVNCVRWSNNGLYLASGGDDKLVMVWRRAAFIGPSTVFGSSSKLANVEQ
WRCVTILRNHTGDVMDVAWSPHDVWLASCSVDNTIVIWNARKFPEMVTCLRGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTVDWQMEANITKPFSECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIVERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQKNGSSPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDISWTLTGLGMLVCSMDGTVAYLDFSLD
ELGDPLSEEEKNSIHQNIYGKSLAITSTEAQLSTTIIENPEMLKYQQERQNSAQANSGPG
SAGPESSTPKLNSVMNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPAL
FNSVPILPSGSSMSSQLIPQLSSDSSPGQASSLGLRPSHDLTSPPASGTAKGLEDNKDGV
KPSLLLTSAPKIEPMKALDSRFTERSKATPGVTAAISSTAGLTPLDRPKDGISALKDVKT
KEDTSSDSEDKMAAINKNLAFGKRKPELLMDGGEVVEKRKKGRPRKDKMAATIAQPFTQI
TPPAEREPSRAAAPPAPVAVLKLPTPSTQKAFTLQVSMEPSVFLEVENEVSVVAGSKLSQ
LRCSRDGRDWNTLLPSSVVTAAGSSDILAVACEDRMLSVFSSCGRRLLPAIQLGTPVSAL
HCSAHFLMALTAGATLSVWDVQKQKALVKNESLLTILPGADITVSQSLLTQQGVPVIGLS
NGKSYCFSSSLETWTLIADKGDSLVQCADFRSCLPTHDAPVSSGPLAVMQGRNLSAGRLA
SRLSSTPHHLQQSMTLAFLENQLASALTLQSAQEYRYWLLIYARFLVNEGSEYRLRELCK
ELLGPVHKSAATAWEPTTLGLRKRELLREVLPVIGENLRFQRLFTEYQDQLELLRNK
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgaagctgctgaagccgagctgggtgagccacaacggcaaacccatattttctgttgat
attcaccctgatgggacaaagtttgcaactggtgggcaaggagaggattctggaaaggtg
atgatatggaacatggcaccagtcctccgagaggaggacgagaagaacgagaatattccc
aaaatgctttgccagatggacaatcacctagcgtgtgtgaactgtgtgcgctggtccaac
aacgggctgtacctggcatcaggaggagacgacaagctggtcatggtgtggaggagagct
gcattcatcggtccgagcacggtgtttgggtcgagcagtaaactggccaatgtggagcag
tggaggtgtgtcaccatcctgaggaatcacactggagatgtgatggacgtggcgtggtct
cctcatgacgtgtggctggcctcctgcagcgtcgacaacaccatcgtgatctggaacgct
cgcaaattcccagagatggtaacatgtctgcgaggacacactgggctggttaaaggtctg
acgtgggacccagtagggaaatacatcgcctcccaggccgacgaccacagcctcaaagtg
tggaggacggtggactggcagatggaggccaacatcaccaaacccttcagcgagtgcggc
gggacgacccacgtcctacgtctgtcctggtctccagacggtcagtatctggtctccgct
cacgccatgaacaactcaggccccaccgctcagatcgtagagagagacggctggaagact
aacatggactttgtgggccaccgtaaagccgtcactgtggtgaaattcaacccaaagatc
tttaagaagaagcagaagaacggcagctctccaaagcccagctgtccatactgctgctgc
gctgttggcagcaaagaccgatcgctctctgtctggctgacctcactgaagcgccctctg
gtggtcattcatgatctttttgataaatcaattatggacatctcctggactctgacaggt
ctggggatgcttgtgtgttcgatggacggcactgttgcctacctggacttctcactggat
gaactgggggacccgctgagcgaggaggagaagaatagtatccaccagaacatctatggt
aagagtctggctataaccagcactgaggctcagctctccaccaccatcatcgagaacccc
gagatgctcaaataccagcaggagcgacagaactcggcccaggccaactcaggaccaggc
agcgccgggcccgaatcctctacccccaaactcaacagtgtgatgaacggagagtctctg
gaggatatcaggaagaaccttctgaaaaagcaagtggagacgagaaccgcagacggtaga
agacgaatcacaccgctgtgtatcgctcagctggacacaggggatttctcgccggcgctg
ttcaacagcgttcccatcctgccctcgggctcctccatgtccagtcagctcatccctcag
ctcagctctgactccagcccaggacaggcctcctctctggggctgaggcccagccatgac
ctcacctcacctccagccagcggcaccgccaagggcctggaagacaacaaggatggtgtg
aaacccagtctgctgctcacctctgctcccaagatcgagccaatgaaagctttggactcc
aggtttacagagaggtcgaaggccacgccgggggtcacagccgccatctcctccaccgct
ggactcactcctcttgacaggccaaaagacggcatctcggccctgaaagacgtaaaaacc
aaagaagacaccagcagcgacagcgaggacaagatggctgccatcaacaaaaacctggcc
tttggcaagaggaaaccagagctgctgatggatggaggagaggtggtggagaagaggaag
aagggacggcccaggaaagacaagatggcagctaccatcgcccaaccctttacacagata
actcctccagcagagcgggagcccagcagggcggcagctcctccagctcccgtcgccgtt
ctcaaactaccaacaccaagtacacagaaggccttcactctgcaggtgagcatggagccg
tcagtgttcctggaggtggagaatgaagtgtcagtggtcgcgggttcgaagctcagccag
ctgcgatgctccagagacggacgagactggaacacgctgctgcccagctcagtggtcact
gctgcagggagcagtgacatcctcgccgtcgcctgtgaggacaggatgttgtcagtgttt
tcttcctgtgggcggcggctccttcctgccatccagctcgggacaccggtgtcagctctg
cactgctcggcccacttcctcatggctctgactgcaggagcgacgctgtccgtctgggac
gttcagaaacagaaagctctggtgaagaacgagtctctgctgaccattttacctggtgct
gacatcacagtgtctcagtctctgctgactcagcagggagttccagtcattggactgtcc
aatgggaagtcgtactgcttcagctcctccctggagacctggactctgatagcagataaa
ggagactctctggtccagtgtgctgacttcaggagctgcctacctacccatgatgcacct
gtgtcttcagggccgctggctgtaatgcagggacgcaacctcagtgctggtcggctggcg
tcccgcctctcctccacccctcaccacctgcagcagagcatgacgttggccttcctggag
aaccagctggcgtctgctctgactctgcagtcggcgcaggagtatcgttactggctgctc
atctacgcccgtttccttgtcaacgaaggctcagagtatcgtctcagagagctctgtaag
gagctgctgggtcccgtccacaaatctgcagccacagcctgggagcccaccactctgggt
cttcgtaagcgggagttgctgcgggaggttttacccgtcattggtgaaaacctgcgattc
cagagactgttcactgaataccaggaccagctggagctgcttcgcaacaaataa

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