Lates calcarifer (barramundi perch): 108881706
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Entry
108881706 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: deleted in lung and esophageal cancer protein 1
KO
K25548
deleted in lung and esophageal cancer protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108881706
Cilium and associated proteins [BR:
lcf03037
]
Motile cilia and associated proteins
Sperm associated proteins
108881706
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_CFAP65_4th
HYDIN_VesB_CFA65-like_Ig
Ig_DLEC1_6th
Ig_Dlec1_1
Cep192_D4
Ig_CFAP74_1st
ASH
Ig-CFAP74_4th
Cep192_D3
OCRL-like_ASH
Cep192_D8
Cep192_D7
Motif
Other DBs
NCBI-GeneID:
108881706
NCBI-ProteinID:
XP_018529320
UniProt:
A0AAJ7LSG5
LinkDB
All DBs
Position
LG24:12342582..12357513
Genome browser
AA seq
1698 aa
AA seq
DB search
MLEEPETRQKSLFDPSVNSHRPASGKSQDISHVLASTFKDLYTKDIIGKDTLSNLIKSRS
GRSSYHDKYVEELQQAHSEYSRRIKEADMLESHIIQARTRAATTESQAYERMKEEIGDVY
DHQGLLTVKSAFSWCVDKDLLEMYNLISPQDYLTSQKPRVGPPVAVKPNPAKPTIAYAMH
VSREPQDDGYTLIPSPEKTALEMNESDLSLTFESSSDTPKRKKNPREKPNQTKPRPKWKG
EASVKDKAEAWEKLQKLRDRHRFLRNPHFLPPNAQPGGMSLIHPRGKVVKTEHERKGVEE
QSSTDDPVPVFLAKPSVVVFTDYSVGHVYETTLELKNLTSSSRHVRVIPPTTSYFSIGLG
RFPGEGGVVAPGMSCKYTVRFAPDSLADYEDFIVVQSQAEHLLVVPIAARRPPPILTLPR
VLDCGYCLIGGVKFVEFLCQNVGLSSGTFCIIPKNQWPASNLRPAARTYFCEQPPFAISP
SLFVLQPGEATVVEVVFFPTTAEKSCQVFTVVCDNCQVKDISIEGEGQLIALELVSVSGE
KEPPVIGEVHDLTAEHFVRFSPCNPQSVQQKKLIIRNNVHLELPFHWQILKPNLLPLLPG
ETPVPSHIQFHLATDDAFHVSPLTGILAPCQDQEFLFTFSPKELKDYHSVCHLVLRDVPQ
LPSEPSENGALQPVRTGSKVHDVIVMEIEVKGSTEPYQVLLEPYAVVIPGEIFICTTIHR
QFKMWNHSKTFIFFHWERMNSSSHIIEVEPSTGRIEENECFDFDLIVTGGKPERVVTSLL
CHIEHHHEPIALAVEVSFKGPIVTLSVPSVDFGLMRLGEQTQTTLLLTNTTQLEASWTIE
DNQQDHQDAQVLVEPCRGVLPPLTSCSVDVFFRPRFCQQLETELELTVENGIGCHLSVRA
DVQSPQVCLMNCELFFSELYIGIPAKSAVTLFNQTLLPSHFRWMSELQGKQASLCTASFD
PSSGTLEPNASMEITVDFTSHTDLELTEVAALCEVQGMNSPLVLGILASKTKKLSVSYSL
PSVCSTPDDESPSELLLDFGGNVVLKRAVTKQFLITNQSAVPAPFTIEAEYFHCHAAKPN
TQSKKRFTYVKKPLHSVQAKKVEEKAHEEFVSSLLAHGKGAAFYVLPNTGTLGPFETQTV
DVTAYTDMWGEYRDRLICKVGDLEPTLIPMQMTVKGCPLYFQMTGPRPDDQNQGPIIQFG
THVSGGDTVSRSLRINNPTMFDIRMDWETYNVDQDDRKLVDMVVAYGDAFPVKDTDGNEV
MSGAIRLSDGSIQTAWERARTPGSEGTSTSPHSKTDMEEEEYITEDHSDEKETCLSFPFP
AKKKLFSVHIRPHVGNLSDYPYCITPQQIVIPAKSSSTVHVSFTPLTLSSSACEARCVGL
ALGFMSLDSKMAAFVLGKVGRAQGLDLEPVRVDLLAAVKPAVLLVQMEEDDGVLEFHASV
GDLLRAESEKEPVVREFDVTQTLQLKNTLEMPLHFRLVTQHPFIVLRPQPRAQTSTSSNP
PTGDSQSLVLQQQNSMQVKVAFHCSLPLLDHGDQTDEEVPPGVTLIHSTSGQRKLRFQQN
LLIHYSNNSLQIVPLCAYLDLSTLRLSTHSVNFGFCYVGQMETVEVNLYSHGAHTYWKSV
IESDEGEPHVFRITPDFGLLKSKELHVTSCSQCLQISFTPSEDREFRATVVIWSPLVKTP
LTLQLQGAGSFDEMYRSS
NT seq
5097 nt
NT seq
+upstream
nt +downstream
nt
atgctggaagaaccggagacgagacagaagtcgctgtttgacccgtctgttaacagtcac
agacccgcctcaggaaaatcacaggacatctctcacgtattagcgagtactttcaaggac
ctttacacaaaggacatcattggaaaagacactttgtccaacctcatcaagtcaaggagt
ggacgaagcagctaccatgacaaatatgttgaagagcttcaacaggctcattctgaatac
agccgacgtataaaagaagcagacatgctggagagtcatataatccaggccagaactcgg
gctgcaaccacagaaagccaggcctatgaaagaatgaaagaggagataggagatgtttac
gatcaccagggtctcctcacagtcaaatcagccttttcctggtgtgtagacaaagatctt
cttgaaatgtacaacctgatttcccctcaggactacttaacctcacaaaaaccacgagtt
ggaccacccgtggcagtaaaaccgaatcctgccaaacccaccatcgcctacgccatgcat
gtgtccagggagcctcaggacgatggttatacgctgattcccagtccagaaaagactgca
ttagaaatgaatgagtcagacctcagcctgacttttgagtccagctcagataccccaaag
aggaagaaaaatcccagggagaagccaaatcaaaccaaacccagaccaaagtggaagggg
gaggcgagtgtgaaggataaggcagaggcgtgggagaaacttcaaaagctgagagatcga
cacagattcctacgcaatcctcacttcctccctccaaatgcgcagcctggtggcatgtcc
ctcatccaccccaggggcaaagtggtgaagacagaacatgagaggaaaggggtggaggag
cagagctccactgatgatcctgtcccagtcttcctagccaaaccttcggtggtggttttt
actgactacagtgtgggacatgtttatgagacaacactggagctgaaaaacttgacttct
tcgagccgtcatgtccgggtcatccctcctaccacttcttacttctccattggcctgggg
agattccctggtgagggtggtgttgttgcccctgggatgagctgtaagtacacagtgcgg
tttgctccagactccctggcagactatgaggacttcatagtggtgcagagccaggctgag
cacctgctcgtggtgcccattgcagccagacgaccccctccaatactcaccttaccaaga
gttctggactgtggttactgtctgatcggaggagtgaagtttgttgagtttctgtgccaa
aatgttggcctcagctctgggactttctgcatcatccccaagaaccagtggccagcctcg
aacctcaggcctgcggccagaacatacttttgtgagcagccaccctttgcaatcagcccg
tctctctttgtgctgcagccaggagaggccactgtggtggaggtggttttctttcccacg
actgctgagaagagctgccaggttttcactgttgtctgtgacaactgccaggtgaaagac
atctccattgaaggtgagggccagctgattgctcttgagcttgtgtctgtatctggggag
aaggagccccctgtaatcggggaagtgcatgacctcactgcagagcactttgtccgtttc
agcccatgtaaccctcagtctgtgcaacagaaaaaactcatcattaggaacaatgtccac
ttggagctgccgttccactggcagatattgaagcccaacctgctgcctctgcttccaggg
gaaacccctgtaccttcccatatccagttccacctagctacagatgatgctttccatgtt
agcccccttacaggcattctggccccctgccaggaccaagagttcctgtttaccttctct
cctaaagagttgaaggactaccacagtgtctgtcacttagtcctgagggatgtcccacag
ctgccatcagagcccagtgaaaacggtgcccttcagcctgtgcgcactggctccaaggtg
cacgatgtcatcgtcatggagatagaagtcaaggggtcaacagagccataccaagtcctg
ctggagccctacgctgttgtgatccctggagagatttttatttgcacaaccatccacagg
cagttcaagatgtggaaccacagcaagactttcatcttttttcactgggagaggatgaac
agcagcagccacataatagaagtagagccatctactggcagaatagaggagaacgagtgc
tttgattttgatctaattgtgactggagggaaaccggagagggttgtgaccagtctgctt
tgccacatagagcaccaccatgaacccatcgccttggctgtggaagtctccttcaagggt
cccatagtgaccctcagtgtgcccagtgtggactttgggctcatgaggctcggggagcag
acgcagaccaccctgctgctcaccaacaccacccagctggaggcttcctggacaattgag
gacaatcaacaggaccaccaagacgcacaggtattagtggagccatgcagaggtgtgctg
ccccccttgacctcttgcagtgtggacgtgttcttcaggcctcgtttctgccagcaatta
gaaacagagctggagctgacggtggagaatggaataggatgtcacctgtcagtgcgagca
gatgtgcagtctcctcaggtgtgtctgatgaactgtgagctgttcttctctgaactctac
atcggaattcctgccaagagcgctgtcactcttttcaaccagaccctgctgccttcacac
ttcagatggatgtctgagctgcagggtaaacaggcttcactgtgcacagccagttttgac
ccatcctctggtactctggaacctaatgccagcatggagatcacagttgattttacctct
cacacagatctggagctgactgaggtggctgctctctgtgaggtccaggggatgaactct
cctcttgttcttggcatcctggcttccaaaaccaagaaactcagtgtgtcttactcgctg
ccaagtgtctgctcaacgccagatgacgagagcccctcagagctgctcctcgactttgga
ggcaatgtcgttttgaagagagccgttacaaagcagtttctgataaccaatcaaagtgct
gtccctgcccctttcaccatagaggcagagtatttccactgccatgctgcaaagccaaat
acccagtccaagaaaaggttcacatatgttaagaagcctcttcactctgttcaagctaag
aaagtagaagagaaagcacatgaggagtttgtgagcagcctgctggctcatgggaaaggc
gcagctttctatgtcctgccaaacacagggacgctgggaccatttgagacccagactgtg
gacgtgacagcctacactgacatgtggggggaatacagagatcgtctcatatgcaaagtg
ggcgaccttgagcccacactcattcccatgcaaatgacagtcaaaggatgtccactgtac
ttccagatgacaggcccacgaccagatgaccagaaccaggggccaatcatacagtttggc
actcatgtatctggaggtgacacagtgtctcgttctcttcgcatcaacaatcccaccatg
tttgacattcgcatggactgggagacatataacgtggaccaggatgaccgtaaactggtg
gatatggtggtggcatatggagacgccttcccagtcaaagatactgatggcaatgaggtg
atgagtggagcaataaggctttctgatgggagcattcaaacagcctgggaaagggctcgc
actccaggctctgaaggaacaagcacctccccccacagcaagactgacatggaggaggaa
gaatacataactgaggatcacagtgacgaaaaggaaacctgtctttcctttccctttcct
gcaaagaaaaaactcttctccgtccacatccgacctcatgtgggcaatctctcagattat
ccctactgcattacacctcagcaaatagtgattccagcaaagagcagcagcacagtccat
gtatctttcactcctttgactctctccagttcagcttgtgaggccagatgtgtgggttta
gctctgggtttcatgagtctagactccaagatggctgcctttgtcctgggtaaagttgga
agagctcagggtttggatttggagcctgtcagggtggatctactagcagccgttaagcct
gcagtgctgttagtgcagatggaggaggacgatggggtgctggagtttcatgcatcggtt
ggtgatttactgagggcagaatcggagaaggagccggtagtgcgggaatttgatgtcaca
cagacccttcagctgaaaaacaccttggagatgcccctacacttcaggctggtgactcag
catccatttatagtgctcaggccccagcctcgagcccagaccagcacttccagcaaccca
cctactggtgacagtcagtctctggtgctgcaacaacaaaacagcatgcaggtgaaagtg
gccttccactgctctctgccccttctggaccacggggaccagacagatgaggaggttcct
cctggggtgaccctaatccacagcacaagtgggcagaggaagctgaggttccagcaaaac
ctcctgattcactacagcaacaacagcctgcagatagtgcctctctgtgcctatctggat
ctatctaccctgcgtctgtccacccacagcgtcaactttgggttctgctatgtgggacag
atggagacagtagaagtaaacctctacagtcatggagcccacacatactggaaatcagtc
atagagtcagatgaaggggagccccatgtgttcaggatcacaccagactttgggcttctg
aagtccaaggagctccacgtcaccagctgcagccagtgtctacagatcagcttcactccc
agtgaggacagagagttcagagccacagtggtgatctggtctcctctggtgaagaccccc
ctcactctgcagctccaaggagcaggatcttttgatgaaatgtacaggtccagctag
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