Lates calcarifer (barramundi perch): 108881712
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Entry
108881712 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108881712
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108881712
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108881712
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108881712
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
108881712
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108881712
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108881712
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108881712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
tRNA-synt_2b
WHEP-TRS
Motif
Other DBs
NCBI-GeneID:
108881712
NCBI-ProteinID:
XP_050922685
UniProt:
A0AAJ8AZ02
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All DBs
Position
LG24:complement(12267458..12273582)
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AA seq
676 aa
AA seq
DB search
MEQVLAPLREAVREQGDLVHQLKEKGASEQEVSKAVAELKARKKILEAKELALQPKDDVV
DRVKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQVWRQHFIQEEQILEID
CTMLTPEPVLKTSGHVDKFADYMVKDARTGECYRADHLLKAHLKKLMSDEKCLVERRIEM
EDVITQMDNYTQQELADLFVKYNVKSPATGNDLTPPVSFNLMFQTSIGPGGNMPGYLRPE
TAQGMFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPND
KVHPKFSNVANLEIMLFSSKAQTSGQSAQIMRLGDAVEQGVINNSVLGYFIGRIYLYLIK
VGLSKDKVRFRQHMENEMAHYACDCWDAESKTSYGWIEIVGCADRACYDLSCHSRATKVP
LVAEKPLKEPKVVNVVQFEPNKGAIGMAYKKDAKLVLEYLAVCDECFITDQEKLLSDVGE
FRIETEGKTFTLTKDMVGVKRFQKTLHVEEIVPNVIEPSFGIGRIMYSIFEHSFHIRQGD
EQRTYFSFPASVAPYKCAILPLSQNQEFMPFVSQLSEAMTKNGLSHKVDDSSGSIGRRYA
RSDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEISELPGMIRGLSNGTLTWAEV
ESKYPIFEGQETSKKE
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagtactggcgcctttgagggaggctgtgagggaacagggcgacttggtgcat
cagttgaaggagaaaggcgcctcagagcaggaggtgagcaaagccgtggcagagctgaaa
gcccggaagaagattcttgaagcaaaggagctcgctttgcaacccaaagatgatgtggtg
gacagggtgaaaatggaggacacattaaagaggagattcttctacgatcaggcttttgcc
atatatggaggtgtgagcggcctgtatgacttcggtccagttggctgcgcccttaagaac
aacatcctgcaggtgtggaggcagcacttcatccaggaggagcagatcctggagatcgac
tgcaccatgctgacccccgagcctgtcctcaaaacttcagggcatgtggataaatttgct
gactacatggtaaaagatgccaggactggagaatgctacagagctgatcacctgctcaaa
gctcacttaaaaaaactgatgtctgatgagaaatgcttggtggagaggcgaatcgagatg
gaggatgtaatcactcagatggataactacactcagcaggagctggctgatctctttgtg
aaatacaacgtcaagtcccctgccacaggaaatgacctcacacctcccgtctccttcaac
ctgatgtttcagacgtccattgggccggggggcaacatgcccggctatctgaggcctgaa
acagctcagggaatgttcctcaacttcaagcgtcttttggagtttaaccagggaaaactg
ccctttgctgctgctcagataggaaactccttcaggaatgaaatctctcctcgctccgga
ctcatccgtgttagggagttcaccatggctgagattgagcactttgtggatccaaatgac
aaggtccaccctaaattctccaatgtggctaacctggagatcatgttgttctcgtcgaag
gcccagaccagcggacagtctgcacagatcatgaggctgggggatgctgtggagcaggga
gtgatcaacaactcggtgctaggctacttcattggaagaatctacctgtatctgattaaa
gtggggctctccaaggataaagtgcgcttccgtcagcacatggaaaacgagatggctcac
tatgcatgcgactgctgggacgcagagtccaaaacctcctatggttggatagaaattgtg
ggctgtgctgatcgtgcctgttacgacctctcgtgtcactccagagcaaccaaagtccct
ctggtggccgaaaagcctttgaaagaacccaaagtagtaaatgtcgtccagtttgaacct
aacaaaggagccatagggatggcctacaagaaagatgccaagttggtcctggagtacctg
gctgtctgtgacgaatgcttcatcactgatcaggagaagcttctcagtgacgttggggag
ttcaggatcgagacagagggcaaaacgttcacactgaccaaagacatggtcggtgtgaag
aggttccagaaaaccttgcacgtggaggagattgttcccaatgtaatcgaaccctcgttt
ggcatcggcagaatcatgtactctatcttcgagcactcgttccatatccggcagggggac
gaacagaggacgtatttcagcttccctgcctctgtagctccatataaatgtgccatcctg
cctttgagccagaaccaggagtttatgccatttgtcagccagttatctgaggccatgacc
aaaaacggtctgtctcataaggtggatgactcttcaggatccatcgggcgacgctacgcc
aggtcggacgagatcggtgtggcctttggcatcaccatcgacttcgacacggtgaacaag
acgcctcacacggccactctgagagaccgggactcaatgaggcagatcagggccgagatc
tctgagttgccagggatgattcgaggtctgtctaatggcaccttgacgtgggctgaggtg
gagagcaagtaccccatatttgaaggacaggagaccagcaagaaggaatga
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