Lates calcarifer (barramundi perch): 108881715
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Entry
108881715 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: glycine--tRNA ligase-like
KO
K01880
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108881715
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108881715
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108881715
03029 Mitochondrial biogenesis [BR:
lcf03029
]
108881715
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
108881715
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
108881715
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108881715
Mitochondrial biogenesis [BR:
lcf03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108881715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HGTP_anticodon
WHEP-TRS
tRNA-synt_2b
OS-D
Motif
Other DBs
NCBI-GeneID:
108881715
NCBI-ProteinID:
XP_018529330
UniProt:
A0AAJ7LQ76
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All DBs
Position
LG24:complement(12274338..12280708)
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AA seq
750 aa
AA seq
DB search
MLLRSAASALLRTSTEISSHCPVFTVRFVRQSLRYPPKNRPFSTSVCLCKKKKKSLWLQL
AEGQTMDGNVEEILAPLRLAVKEQGDLVRQMKQEGAPDVDITKAVAELKARKRTLEAKEL
ALQPKDDIVDRTKMEDTLKRRFFYDQAFAIYGGVSGLYDFGPVGCALKNNILQAWRQHFI
QEEQILEIDCTMLTPEPVLKTSGHVDKFADYMVKDVKNGECFRADHLLKAHLQKLMSDKK
CTAERKAEMEEVITQMDNYTQQELTDLFVKYNVKSPTTGNDLTPPISFNLMFQTSIGPGG
NMPGYLRPETAQGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAE
IEHFVDPTEKVHPKFSSVADLDIILYSSKAQTSGQSAQIMRLGDAVEQGVINNSVLGYFI
GRIYLYLTKVGIAKDKLRFRQHMDNEMAHYACDCWDAEAKTSYGWIEIVGCADRSCYDLK
CHARATKVPLVAEKPLKEPKVVNVVQFEPNKGAIGKAYKKDAKFAMEYLSLCDECFITEQ
EQLLNETGXSFTIETEGKTFKLTKDMVSVKRFQKTLHVEEVVPNVIEPSFGIGRIMYTIF
EHTFHVREGDEQRTYFSFPATVAPYKCSVLPLSQNQEFMPFVKELSEAMTRNGVSHKVDD
SSGSIGRRYARTDEIGVAFGITIDFDTVNKTPHTATLRDRDSMRQIRAEVSELPVIVRDL
ANGTLTWAEVESKYPIFEGQETSKKDTVEE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcttcttcgtagcgcagcatcagcactgctgaggaccagcactgagatttcctcccac
tgtccggtgttcacggtccggtttgttcggcagtcgctccgctacccgcccaaaaacagg
ccgttttcaacgtcggtctgcttgtgtaagaagaagaagaaaagcctgtggctacaactg
gcggaaggacaaaccatggacggcaacgttgaggaaattctcgcccctctgaggcttgca
gttaaagaacagggggacctggttcgccaaatgaaacaggagggtgccccagatgtggat
attactaaagctgtggctgaactgaaagcgaggaagagaactctggaggccaaggaactg
gcattgcaacccaaagatgacatcgttgacagaaccaagatggaggataccctcaagagg
cgattcttctacgaccaggcctttgccatctatggaggtgtgagcggcctgtatgacttc
ggccccgtgggctgcgcccttaagaacaacatcctgcaggcctggaggcagcacttcatc
caggaggagcagatcctggagatcgactgcaccatgctgacccccgagcctgtcctcaag
acttcaggacatgtggacaaattcgctgactacatggtgaaagatgtcaagaatggggaa
tgtttcagggctgaccacctcctcaaagcccatctccagaagctgatgtctgataagaag
tgtacagcagagaggaaggctgagatggaggaagtcatcactcagatggacaactacacc
cagcaggaactgactgatctgtttgtgaaatacaacgtcaagtcacccaccacagggaat
gacctcacgcctcccatctccttcaacctgatgtttcagacgtccattggaccagggggg
aatatgccaggctatctgaggcctgaaacagctcagggaatcttcctcaacttcaagcgt
cttttggagtttaaccagggaaaactgccctttgctgctgctcagataggaaactccttc
aggaatgaaatctctcctcgctctggactcatccgtgttagagagttcaccatggctgag
attgagcactttgtggatcctactgagaaggtccacccaaaattctctagtgtagctgac
ctggacatcatattgtactcctctaaggctcagaccagcggacagtctgcacagatcatg
agactgggggatgctgtggagcagggagtgatcaataactccgtcctgggatatttcatt
gggaggatctacctctaccttactaaagttggtatcgccaaagacaagctgcgtttccga
cagcacatggacaacgagatggctcactacgcctgtgactgctgggacgcagaagccaaa
acctcctatggctggattgaaattgtggggtgtgctgaccggtcttgctatgatctgaaa
tgccacgcaagagccacaaaggtccctctggttgctgagaagcctcttaaagaacccaaa
gttgtaaatgtcgtccagtttgagcccaacaagggagccatcgggaaggcctataagaag
gatgccaagtttgccatggagtatctgtctctgtgtgacgaatgcttcattacagagcag
gagcagctacttaatgagactgggtgaagtttcaccatcgagacagagggcaagacgttc
aagctcacaaaggacatggtcagtgtgaagcggttccagaagactctgcacgtggaggaa
gttgtcccgaacgtaattgaaccctcctttggcattggtaggatcatgtacaccatcttt
gagcacacattccacgtcagagaaggtgacgaacagagaacgtacttcagcttccctgct
actgtagctccatacaaatgttccgtcctgcctctgagtcaaaaccaggaattcatgccc
ttcgtgaaggaattatctgaggccatgacccggaacggtgtgtctcacaaggtggacgac
tcctcaggatccatcgggcgacgctacgccaggacagacgagatcggagtggcatttggc
atcaccatcgactttgacacagtgaacaagacgcctcacacggccactctgagagaccgg
gactcaatgagacagatcagggcagaggtcagcgagttgcctgtgattgttcgggatttg
gccaatggcactttgacctgggcagaagtggagagcaagtaccccatctttgaaggacaa
gagaccagcaagaaggacacagttgaagagtaa
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