Lates calcarifer (barramundi perch): 108881805
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Entry
108881805 CDS
T04895
Name
(RefSeq) nuclear receptor coactivator 2 isoform X1
KO
K11255
nuclear receptor coactivator 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108881805
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
108881805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NCOA
PAS_11
DUF1518
SRC-1
Nuc_rec_co-act
DUF4927
NCOA_u2
PAS
PAS_3
PAS_9
HLH
bHLH_IRO3
PAS_4
TFIIIC_delta
Motif
Other DBs
NCBI-GeneID:
108881805
NCBI-ProteinID:
XP_018529491
LinkDB
All DBs
Position
LG24:10911040..10964466
Genome browser
AA seq
1550 aa
AA seq
DB search
MSGVGENSSDPARAESRKRKECSAELLGPSPKRSNEKRNREHENKYIEELAELIFANFND
IDNFNVKPDKCAILKETVKQIRQIKEQEKAAAANEEEVQKADVSSTGQSVIDKDALGPMM
LEALDGFFFVVNMEGNIVFVSENVTQYLRYNQEELMNTSVYSVLHVGDHAEFIKNLLPKS
LVNGVPWSSEGPRRNSHTFNCRMLVNPHSDSQDEPHEHEPQQQKYETMQCFAVSEPKSIK
EEGDDFQSCLICVARRVPMKERPMLPTHESFTTRQDLQGKITSLDTSLLRASMKPGWEDL
VRRCIQRFHLQNDGEMSFAKRHQQEVLRHGQAFSPIYRFSLSDGTIVSAHTKSKLVRSPA
TNEPQLYMSLHILQREQTVCGMGQDMGPGNQATGMAPKPMNSSTPSMTPPTPGSLPGSGP
QGQDTTISSNSTPFSPPGPAGPREPAAMGHMQGYRFGCPPPHNHTGGMQPPQQGPNWRMN
SPSRASPSPAGGPHPPQQNSMLSPRHRGSPGGAGSPRVAGGLHSPSPVGMCGGGPGGAGS
SSTTSAHANSYTSSSLSALQALSECHGVGHGHGPPHAHTLGSPDRKIGSPAGVTPGSGVN
SHLMSKIGGGGGAAGGTGDSFGPHTEVGQGHTQGQTESNLSEPKEEREGPPDGHDTHSRL
HDNKGHTKLLQLLTTKPEPLETPLSPGTGGEGKDQAGTGVRGGHTGGNTHATSLKEKHKI
LHQLLQNSTSPVDLAKLTAEATGKEMGQDQTQGAGSTTPGAEITPKQEPLSPKKKDNALL
RYLLDKDDTVLKDKVPKLEPGEVKVEGGKSTHVKAEKQDAGYDRAEQSSELDDILNDLQN
AQPQLFCEPRPVSLPSPMDKQNIINDILQMSETNPAIVAQQQHRGISAGMGPTNFGGVRP
GQPGRGLPVRSVSLDMNVSPQQASLQYPIRATSPYTLMQQQQQQGMVGNHGMMANQAGMV
NTGLMAPGGPRPGMQQQEGWVGSASAPPLGASGPGQQGAMQGRMGPNGAPMRPNSQPGPR
QMLQSPMMANAQPDMDIGMVSHHFSQQQAPPNQTAPWPDSMMPIDQTAFVNRPVHSAPQD
DLLCSTGLASGDGSAVDEGALMSQLYTALKDFDGLEEIDRALGIPALVEQNQTIEPDQFP
QDPSMMLDQKPPMYTQQFGPPPSHMAQRGYPGTPMQEPGFHPMSGQMGPRPGYPMMRMQA
RPGLRPTGVVPNQPNTLRLQLQHRLQSQQQNRQPMMTQMSSVSNVNLPLRANAPNQGTIN
AQMLAQRQREMLSNHLRQRQQQQQVQQAQQVQQQRSMAMRGPSLNLPPNMAAAGGMSNPR
IPQANPQQFPYPPSYGTSTGLASPPPPTSPFSSPLSPSLPSLPPNPQLHLHGTSSSSSTS
SSSSQMMMGNTNMMGGQYGAVLSPQMQHSAFQFPNSGMSQQADGGFGGPGTPQSPLLSPR
MAHTQSPMMQQGQGNATFQGSPDMNGWPQGNIGGNSMFSQQQASPQFTQQSNSNMYNGNG
MNLNNVSMATNMATSSMSSMGQMAGQMSVTSMASGPSPGLPSMGQEQKYC
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagtcggtgaaaactcatctgaccctgcaagggcagagtcacgaaaacgcaaa
gaatgttctgccgaacttctaggacccagtcccaagcggagcaacgagaagcgtaaccgc
gagcatgagaacaaatacatcgaggagctcgccgagctgatctttgccaacttcaacgac
atcgacaacttcaatgtcaagcctgacaaatgtgcaatcctgaaggaaactgtgaaacaa
atcagacagataaaggagcaagaaaaagctgccgcagcaaatgaggaggaggtgcagaag
gctgatgtctcatcaacaggccaaagtgtgattgacaaagatgccttgggaccaatgatg
ctggaggccctggacggcttcttctttgtagtgaacatggagggtaacattgtgttcgtg
tctgagaatgtgacccagtacctgcgctacaaccaggaggagctgatgaacaccagtgtc
tacagcgtgctgcacgtcggcgatcatgccgagttcatcaagaacctgctgcccaaatcc
ctcgtgaatggcgtcccatggtccagcgagggtccgaggaggaacagccacacgttcaac
tgccgaatgctggtcaacccccacagcgacagccaggacgagccacacgagcacgagccc
cagcagcagaaatatgagaccatgcagtgctttgccgtttcggagcccaagtccatcaag
gaggaaggagatgactttcagtcgtgcctgatctgtgtggcccgcagggtgcccatgaag
gaaagacccatgcttcccacgcatgagagcttcaccacgcgccaggacctgcaaggtaag
ataacgtccctggataccagcctgctgcgggcatccatgaaaccaggctgggaggatcta
gtgaggcgctgcattcagaggtttcacctacagaatgatggagagatgtcttttgccaag
agacatcagcaggaagtactccgccatggccaagcgttcagccccatctacaggttctcc
ctctctgatgggaccatcgtgtcagcccacaccaagagcaaactggtgcgctcgcccgcc
accaacgaaccccagctctacatgtccctgcacattctacagagggagcagacagtatgt
ggaatgggccaggatatgggtcctggcaatcaggctacagggatggctccaaaaccaatg
aactcctctactccctccatgactcctccaaccccaggcagtttgccaggttcggggcct
cagggccaagacactaccatcagcagcaacagtacgcctttttcccctccaggacctgct
ggccccagagaaccagcagccatgggccatatgcagggctaccgttttggctgtccccct
ccacacaaccacactgggggcatgcagccaccacagcagggcccaaactggaggatgaat
agcccctctcgcgctagccccagcccggctggagggccccatccaccccaacagaactct
atgctgtcacccaggcaccgtggtagtcctgggggagcaggcagccctcgcgtagcagga
ggcctgcattcaccatctccggtggggatgtgtggtggaggacctggaggagcaggcagt
agtagcacgacaagtgcccatgctaacagctacactagcagttctctgtcagctctacaa
gccttgagtgagtgccatggtgtaggacacgggcatgggccccctcatgcacatacactg
gggtccccagaccggaagataggctccccagctggggtcacaccagggtcaggggtaaac
tctcacctgatgtcaaaaattggtggagggggtggtgctgctggtggtacgggagactca
tttggccctcacacggaggtgggccaggggcacacccagggccagacagagagcaacctg
tctgagcccaaagaggagagagaagggccccctgatggccatgacactcacagtcgtctt
catgacaacaagggccacaccaagctactgcaactgctcaccaccaagccagagccttta
gaaacaccgctgtccccgggcacaggaggtgagggcaaggaccaggccggtacgggggtc
cggggtggccacacaggaggaaacacacatgctacatccctcaaagaaaaacacaagatc
ctccatcaactgctacagaacagcacgtctcctgtagacctggccaaactcactgcagag
gccacaggcaaagagatgggccaagaccaaacccagggtgctggtagtacaacccctggg
gcagaaattactcctaagcaggagcccttgagccccaagaagaaggacaatgccctgcta
cgttacctactggataaggatgacactgtattgaaggacaaggtccctaagctggagcct
ggggaggtgaaggtcgaagggggcaaaagcacccatgttaaagcagagaaacaagacgca
ggatacgaccgggctgagcagtcatcagagctggatgacatcctgaatgacctgcagaat
gctcagccacagcttttctgtgagccacggcctgtttcgctgcccagtcccatggataaa
cagaacatcatcaatgatatcctgcagatgtccgagacaaatcctgccatagtggcacag
cagcagcacaggggcatcagcgctggcatgggcccaactaacttcgggggtgtccgacca
ggccagccagggaggggtctgcctgtgagaagcgtgtctctggacatgaatgtgtccccc
cagcaggcctcattacagtaccccataagggccacaagcccatacactcttatgcagcag
caacagcagcaaggcatggtgggaaatcatggcatgatggctaaccaggctggtatggtc
aacacaggactcatggctccaggtggtccacggccaggcatgcagcagcaggagggctgg
gtgggctcagcctctgcccctcctctgggagcatctggacctgggcagcaaggtgccatg
cagggcaggatggggccaaacggtgctcccatgaggcccaacagccagccagggccccgg
cagatgctccagtccccaatgatggccaatgcccaacctgacatggatattggtatggtc
agccaccatttctcccagcagcaagccccacccaatcaaacagccccatggccagacagc
atgatgcccattgaccagacagcatttgtaaacaggccggtgcactcagctccccaggac
gacttgttgtgcagcacggggctcgcctctggtgatggcagcgcagtagacgagggagct
ctgatgtcccaactgtacacagcactaaaagattttgatggtttggaggagattgatcgt
gcccttgggatccctgctctggtagaacagaaccaaaccattgagccagaccagttcccc
caggacccctccatgatgttagaccagaagccccccatgtacacccagcaattcggaccc
ccaccatcccacatggcccaaaggggctaccccggcactcccatgcaagagccgggcttc
caccccatgtctggtcagatgggtccgcggccaggttaccccatgatgaggatgcaggca
cggcccggactcaggcccaccggtgtcgtccccaaccaacccaacacactacggttacag
cttcagcaccggctacagtcacagcagcagaaccgtcagccaatgatgactcagatgagt
agtgtgtcaaatgtgaacctacctcttagagccaatgctccaaaccaggggaccatcaat
gctcagatgttggcgcagcgtcagcgggagatgctgagtaatcacctgagacagaggcag
cagcagcagcaggtccagcaggcccagcaggtccagcagcaaaggagcatggccatgagg
ggcccgagcctcaacctgcctcccaacatggccgctgctggaggcatgagtaacccccgg
atcccccaggccaacccccagcagttcccctacccgcccagctacggtaccagtacaggc
ctggcctcgccacctccccctaccagccccttctcctccccgctctcccccagcctgccc
tctctccccccgaaccctcagctccacctgcatggcacctcctcctcttcctccacctcc
tcctcctcctcacagatgatgatgggaaacacaaacatgatgggcggacagtacggggcc
gtactcagcccccaaatgcagcacagtgcctttcagtttcccaactcaggtatgagccaa
caggcagacggaggctttggaggtcccggcacaccacagagccccctgctttctccccgc
atggcccacacgcagtccccgatgatgcagcagggccaaggaaacgccactttccagggc
tcccctgacatgaatggctggccgcagggcaacataggtggcaacagtatgttctcacag
cagcaggcatcaccacagttcacccagcagagtaacagcaacatgtacaatggcaatggt
atgaacctcaacaacgtgtctatggccaccaacatggcaaccagcagcatgagcagcatg
ggccagatggccggacagatgagtgtcacgtccatggcctcagggccctcacccggtttg
ccctccatggggcaagaacagaagtactgttga
DBGET
integrated database retrieval system
