Lates calcarifer (barramundi perch): 108881906
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Entry
108881906 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: zinc finger and BTB domain-containing protein 22b
KO
K10502
zinc finger and BTB domain-containing protein 22
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108881906
04121 Ubiquitin system [BR:
lcf04121
]
108881906
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
108881906
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
108881906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2
Zn_ribbon_SprT
C2CH-4th_BIRD-IDD
DUF5810
zf-C2H2_jaz
zf-Di19
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
108881906
NCBI-ProteinID:
XP_018529622
UniProt:
A0AAJ7PKJ3
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All DBs
Position
LG3:19843788..19852310
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AA seq
794 aa
AA seq
DB search
MQSLPMEVGSSSSSSAPSDTSGSMVQVCFPSAQASVLDSLNRQREEGRLCDLSIHVQGQV
FKAHRCVLAASSPYFHDQVLLKNMSTVSIPAVMDPLAFESVLSCAYTGQLRMLREDIVNY
LTVGSVLQMWHIVDKCTELLKEGRAAAGGGSSGGGGAQDRASVGGGAGSANPGCSSSNGD
GGAAGGNGAGGDGANGGGQAQVVESNEPQRASQPPSRPSVSESQSPSSTNYFSPRDGSSF
GGGGAAAAGASVDGGGASNTPSYCTPSGGEEAFLIEEEEEEVEEEEEEVLYHQRKRGRGG
GSGRRKKMSSVSEQEVGVSDSFGVSSYQDGEDSALPSQKRPTYSQPSIMPRKQWVVVKTE
RTEDDDLIVVSGEEGGEDEEDEDEREVELTRERERSDFNISNVRSLSAELGGRAENDMDS
QMDYCQSSEDYLKFEGSLMDQTLAQHLHDSAAGQSQSANRAVSALLGQVQSAATARAQLF
PLDMQGNQILLYSQASGLSLDAAAPPLGMAGGMIGGASFKGPGLEHGAVHLSVQSGLGAD
GMDSGGIGGGSGSSGSNSSTGGSGKVFMCHCGKTFTHKSMRDRHINMHLDLRPFHCPVCA
KKFKMKHHLTEHMKTHTGLKPYDCLGCGKKFMWRDSFMRHRSHCERRSGLGDGGEGGSSG
EGGRRGGGGGEDGPDLISSPHLLLSAGEGGQGNILGGGGGRGGVSVSSPHLSGAVLSPQH
GGVSATGSSSSNNSVSNSSSAALTNNVAAGALLGVVSQSPGQGQGSGMFGGLGLGRGVCD
EDVCEVSANDSSVT
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgcagtccctgcccatggaagtgggcagcagcagcagcagctcagctcccagcgacaca
tctggctcgatggtgcaggtgtgcttccccagcgctcaggcctcagtgctggacagcctg
aaccggcagagagaggagggcaggctctgtgacctctccatccacgtccagggacaagtc
ttcaaggcccaccgctgcgtcctggccgcgtcctcgccctacttccacgaccaggtccta
ctgaagaacatgtctacagtctccatcccggcggtgatggaccccctggcgttcgagagc
gtgctgagctgcgcctacaccggtcagctccggatgctacgcgaggatatcgtcaactac
ctcacggtgggcagcgtcctgcagatgtggcacattgtggacaaatgcacggagctgctg
aaggagggccgagctgcagccggaggagggagcagtggaggaggtggtgcgcaggacaga
gccagcgtcggaggaggagcggggtcggctaaccccgggtgcagcagcagtaatggcgac
ggtggtgcagctggtggtaatggagctggtggtgatggtgctaatggtggtggtcaagct
caggtcgtggagtccaacgagccccagcgtgcctctcaacctcccagccgcccgtccgtg
agcgagagccagtctcccagcagcaccaactacttcagccccagggacgggagcagtttt
gggggaggcggtgcagctgcagctggggcttcagtggacggaggtggggctagcaacacc
cccagctactgcaccccatctggaggggaggaggcctttcttattgaggaagaggaggag
gaagtagaggaggaagaggaggaggtgctgtaccaccagaggaagagaggaagaggagga
ggcagcgggaggaggaagaaaatgagctcagtgtcagagcaggaagtcggggtcagcgac
agctttggtgtgtcctcctatcaggatggggaggattcagcgttgccgtctcagaagcgt
cccacctacagccagcccagcatcatgcctcgcaaacagtgggtggtggtgaaaaccgaa
cgcacggaggacgacgacctcatcgtagtgtccggggaggagggaggagaggacgaggag
gacgaggatgagagggaagtggagctgaccagagagagggagagaagcgacttcaacatc
tccaacgtcaggagcctttcagccgagctgggaggccgagccgagaacgacatggactca
cagatggactactgccagtcttcagaagactacctcaagttcgaaggcagtttaatggac
cagacgttagcgcagcaccttcatgacagcgctgcaggtcagagccagagcgccaaccgt
gccgtttcagctctgctgggccaggtccagtctgcagccacggcccgggcccagctcttc
cccctggacatgcaggggaaccagatcctcctctacagccaggcctccggactctctctg
gacgctgccgcccctcccctggggatggctggtggtatgatcggaggagcctctttcaaa
ggtcccggtctggagcacggtgcggtccacctgtcggtgcagagcggtttgggagctgat
ggcatggacagtggggggattggaggtgggagtggcagcagtggcagcaacagcagcacc
gggggttcagggaaagtgttcatgtgccactgtgggaagaccttcacccacaagagcatg
agggaccgccacattaacatgcacctggatctgaggcctttccactgccccgtctgtgcc
aagaagttcaagatgaagcatcacctcacagagcacatgaagacgcacacaggcctcaag
ccgtacgactgcctcggctgtggcaagaagttcatgtggcgcgacagcttcatgaggcac
cgctcgcactgcgagaggcgcagcggcctgggggatggcggggaaggtgggagcagcggc
gagggagggagaagagggggaggtggaggtgaggatgggcctgatttgatttcctcccct
cacctcctcctgtctgcaggcgaaggaggtcagggtaatattctgggaggaggaggaggg
agaggaggagtgtctgtttcttctccgcatctttccggcgctgttctgtcaccgcagcac
ggcggcgtctcggccacaggaagcagcagcagtaacaacagtgtgagtaacagcagcagt
gctgctctgaccaacaacgtggccgcaggggcgcttctaggagtggtctctcagagtcca
ggtcagggtcagggatctgggatgttcggtggtctagggctgggccgaggtgtgtgtgat
gaagacgtgtgtgaagtcagtgccaatgacagcagcgtgacttaa
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