Lates calcarifer (barramundi perch): 108881922
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Entry
108881922 CDS
T04895
Name
(RefSeq) proliferating cell nuclear antigen
KO
K04802
proliferating cell nuclear antigen
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03030
DNA replication
lcf03410
Base excision repair
lcf03420
Nucleotide excision repair
lcf03430
Mismatch repair
lcf04110
Cell cycle
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108881922
03410 Base excision repair
108881922
03420 Nucleotide excision repair
108881922
03430 Mismatch repair
108881922
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108881922
09144 Cellular community - eukaryotes
04530 Tight junction
108881922
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108881922
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108881922
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
108881922
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
108881922
MMR (mismatch excision repair)
Other MMR factors
108881922
TLS (translesion DNA synthesis) factors
Other TLS factors
108881922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCNA_C
PCNA_N
Rad1
Rad9
Hus1
Herpes_UL42
Motif
Other DBs
NCBI-GeneID:
108881922
NCBI-ProteinID:
XP_018529649
UniProt:
A0A4W6C885
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Position
LG13:complement(4643625..4647426)
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AA seq
260 aa
AA seq
DB search
MFEARLVQGSILKKVLEALKDLITEACWDVSSSGISLQSMDSSHVSLVQLTLRHDGFDSY
RCDRNLAMGVNLSSMSKILKCAGNEDIITLRAEDNADTLALVFETLNQEKVSDYEMKLMD
LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSQIGDAVMISCAKDGVKFSASGELGTGNI
KLSQTSNVDKEDEAVTIEMNEPVQLIFALNYLNFFTKATPLSKTVTLSMSADIPLVVEYK
IADMGHVKYYLAPKIDEEAS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaggctcgcttggtccagggctccatcctgaaaaaggtgctggaagctctgaag
gatctgatcacagaagcctgctgggatgtcagctcgtccggcatctccctgcaaagcatg
gactcctctcacgtctccctggtccagctcaccctgcggcacgacggtttcgactcatac
cgctgcgacagaaacctcgccatgggagtcaaccttagcagtatgtcaaaaatcctgaag
tgtgcaggaaacgaggacatcatcaccctccgagcagaagacaatgcagacacactcgcc
cttgtgtttgagacactcaaccaggagaaagtctcagattacgagatgaagttgatggac
ctggatgtagagcagctgggtattccagagcaggagtacagctgtgtggtgaagatgccc
tctggggagttcgcccgtatctgccgcgacctgtcccagatcggcgatgccgtcatgatc
tcctgcgccaaggacggagtcaagttctctgcctcaggagagctgggcacaggaaacatc
aagttgtcccagaccagcaatgtagacaaagaggatgaggcagtcactattgagatgaat
gaacccgtccagttgatctttgccctcaactacctgaacttcttcaccaaggccacgcca
ctgtcaaagaccgtcaccctcagcatgtctgctgacatccccctcgtggtggagtacaag
attgctgacatgggacacgtcaaatactacttggcaccgaagatcgatgaagaggcttcc
taa
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