Lates calcarifer (barramundi perch): 108882003
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Entry
108882003 CDS
T04895
Symbol
rasgrf2b
Name
(RefSeq) LOW QUALITY PROTEIN: ras-specific guanine nucleotide-releasing factor 2
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108882003 (rasgrf2b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
PH_11
PH_16
IQ
DUF2443
Motif
Other DBs
NCBI-GeneID:
108882003
NCBI-ProteinID:
XP_050931231
UniProt:
A0AAJ8BE87
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Position
LG13:4875547..4916665
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AA seq
1268 aa
AA seq
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MQKSVRYNEGHALFLSAVARKEGTKRGYLSKKAAENSRWHEKFFALYQNILFYFENEQSA
RPAGIYLLEGCTCERAPAPKMSTTGKEALEKQHYFLIVFGHDGQKPLELRTEEESECDEW
VEAIQQASYSDIIIEREVLMQKYIHLVQIVETEKVAANQLRTQLEDQDTEIERLKAEIIA
LNKTKERMRPYHVNHENEDPDIKKIKKVQSFMRGWLCRRKWKIIVQDYICSPHAESMRKR
NQIVFNMVEAETEYVHQLYILVNCFLRPLRMAASSKKPPISHDDVSSIFLNSETIMFLHE
IFHQGLKARIANWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQVLANCKQNRDFDKLLK
QYESNAACEGRMLETFLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLEELSR
VMHDEVSDTENIRKNLAIERMIVEGCDILLDTSQTFVRQGSLIQLPSVERGKLSKVRLGS
LSLKKEGERQCFLFTKHFLVCTRSSGGKLHLLKQGGVLSLIDCTLIEEPDASDEESKVGG
QVFGQLDFKLVVEPSDSPSFTVVLLAPSRQEKAAWTSDISQCIDNIRCNGLMTSVFEENS
KVTVPHMIKSDVRLHKDDVDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLSIDFLNT
FLHTYRIFTTATVVMDKLADIYKKPFSSIPIRSLELFFATNQNNRGGEHINDKSPRLCRK
FSSPPPLSIPSRTSSPVRTRKLSLHSPITARVGGLDLTSPLSNSSANTSQSAASSPTSAH
TPQTPTPQTPTPTTSSPPLPPSSTSPPPNNSKPPQDQVPPIPSSPDQSPGPTAEGEEVPR
IDPFCGKLRRSIRRAVLESVSLEKIIPESPQSSEAGDMSPCRSPSTPRHLRYRQPGVQSG
ENSRCSVSPASAFAIATAAAGHGTPPVFTNSERTCDKEFIIRRAATNRVLNVLRHWVSKH
SQDFEMNGELKMSVICLLEEVLRDPDLLPQERKATANILSALSQDEQEDAQLRIEDILQM
ADCPKAECFESLSAMELAEQITLLDHIVFRSIPYEEFLGQGWMKVDKTERTPYIMKTSQH
FNDMSNLVASQIMTHTDVGSRASSIEKWVAVADICRCLNNYNGVLEITSALNRSAIYRLK
KTWAKVSKQTKALMDKLQKTVSSEGRFKNLRETLKNCNPPCVPYLGMYLTDLAFIEEGTP
NFTEEGLVNFSKMRMISHIIREIRQFQQTPYRIEHQAKVTQYLLDKTLIMDEDTLYDLSL
KIEPRLPA
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagcgtccgctacaacgaaggacacgcgctgttcctgtcggcggtcgcgcgt
aaagaggggaccaaacgcggctacctgagcaagaaggcggcggagaacagccgatggcac
gagaagttcttcgccctctatcagaatatactgttctacttcgagaacgagcagagcgcg
cgacctgccgggatttacctgttggaaggatgcacctgcgagcgtgcgccggcacccaag
atgtccaccactgggaaggaagcgctggagaaacagcactacttccttatcgtgtttggt
catgatggacagaaacctctggagctgcggacggaggaggagagtgagtgtgatgaatgg
gtggaggccatccagcaggccagttattctgacatcatcatcgaacgagaagtgctgatg
cagaaatacatccaccttgtacagatagtggagactgagaaggtggctgccaatcagctg
cgtactcagctagaggatcaggacacagaaattgagaggctcaaagcagagattatagct
ctgaacaaaaccaaggagcgaatgcggccttaccacgtcaaccatgaaaatgaagacccg
gatatcaaaaagatcaaaaaggtgcagagcttcatgcggggctggctctgtcggaggaag
tggaagatcatcgtgcaggattacatctgctctcctcatgctgagagcatgaggaagagg
aaccagattgtcttcaacatggtggaggcagagacagagtacgttcaccagctctacatc
ctggtcaactgtttcctcagacctctgagaatggctgccagctccaagaaaccccccatc
agccatgacgatgtcagcagcatcttcctaaacagtgagaccattatgttcctacatgag
attttccatcaaggcttgaaggcgaggatagccaactggccaactctggtgctggctgac
ctatttgacatcctgctgcccatgcttaacatctatcaggagtttgtgagaaaccatcag
tatagcttgcaggttttggccaactgtaagcagaacagagactttgacaagctactgaaa
cagtacgagtccaacgctgcctgtgagggaaggatgctcgagaccttcctcacatacccc
atgttccagattccccgctacatcatcaccttgcatgagttactggcacacacacctcat
gagcatgtggagcgcaagagtctggaattcgccaaatccaaattagaggaactgtccaga
gtaatgcatgacgaggtgagtgacacagagaacatccggaagaacctggccatagagagg
atgatagtggagggctgtgacatcctgctggacaccagccagaccttcgtcaggcagggc
tctctgatccagctgccgtcagtggagcgagggaagttaagtaaggtccgtttgggctct
ctctctctgaagaaggaaggggaaaggcagtgtttcctcttcaccaaacacttcctcgtc
tgcacacgcagctctgggggaaaactgcaccttctcaagcaaggcggagttttgtcccta
attgactgcacacttatagaggaaccagatgccagtgatgaggagtctaaagttggtggt
caggtatttggtcagctggactttaagcttgttgtagagccgtcagactcgccttcattt
actgtggtgttgctggcgccatcgcggcaggagaaggctgcatggaccagtgatattagc
cagtgtatagataacatccgctgcaatggcttgatgaccagtgtatttgaggaaaactcc
aaagtcactgtgcctcatatgatcaaatccgatgtgcgtctccataaagatgatgttgac
atttgcttcagcaagacgctcaactcctgcaaggtcccccagatccgctacgccagcgtg
gagcggctgctggagaggctgaccgacctgcgtttcctctccatagacttcctcaacacc
ttcctgcacacatacaggatcttcaccacggcaacggtggttatggacaaactggccgac
atctacaagaagcccttttcctccatacctatcaggtccttggagctgttctttgctacc
aatcagaataacagaggtggtgaacatataaacgacaaatctcctcgtctctgccgcaag
ttctcctctcctccccctctgtccatcccatcccgcacctcctcccctgttagaacacga
aagctttccctccactcccccatcaccgccagggttggaggccttgacctgaccagtcct
ttgtcaaactccagcgccaacacttcccagtctgctgccagtagccctacatctgcccac
accccacagaccccgacgcctcagaccccgaccccaaccacctcttctcctcctctgcct
ccctcctctacctctcccccacccaacaactccaagccaccacaagaccaagttccaccc
attccttcatccccggaccagagtcccggcccaactgcagagggagaggaggtgcccagg
atcgaccctttctgtggaaaattgcgccggagcatccgcagagctgtgctggagtcagtg
tcactggagaaaatcatcccagagtctcctcagagcagtgaagcaggagacatgtctcca
tgtcgctctccctcaacacctcgacacctccgctacagacagcctggagtccagtcgggg
gagaactcacgctgctcagtctctcctgcctccgccttcgctatcgccacagccgcagca
ggacatggtacaccaccagtgttcactaactctgaaagaacttgtgataaagagttcatc
atccgcagagctgcaactaacagagttctcaacgtgctgcgccactgggtctccaaacac
tcacaggactttgagatgaatggggagctgaagatgtcagtgatctgtctcctggaggag
gtgctcagagatccagaccttctgcctcaggagaggaaagctactgcgaacatactaagt
gccctttctcaagatgagcaggaagatgcccagctgaggatagaggacatcttacagatg
gcggactgtccgaaggcagagtgttttgagtctctctcggcgatggagctggctgaacag
atcactctgctggatcatattgtcttcaggagcattccttatgaggagttcctgggccag
ggctggatgaaggtcgataagacagaaaggacgccctacatcatgaaaactagccaacac
ttcaatgatatgagtaacctggtggcatcacagattatgacccataccgatgtgggctcg
agggccagctccatagagaagtgggttgctgtggctgacatctgccgctgcctcaacaac
tacaatggagtactggaaatcacatctgcactcaatcgcagtgccatctaccgtttgaag
aagacttgggccaaagtcagcaaacagactaaagccctgatggacaaactgcagaagacc
gtgtcctctgagggaaggtttaaaaatctgagggaaaccctgaaaaactgcaaccctcca
tgtgtgccatacctgggaatgtatctgacagacctggcctttattgaggagggaacaccc
aattttactgaggaaggtcttgttaacttctccaaaatgaggatgatatctcatatcatc
agagagatccgacagttccagcagactccgtacagaatagagcatcaagccaaggtgacc
cagtaccttctggataagactctgatcatggatgaagacacgctctatgatctctcactg
aagattgagcctaggcttcctgcctga
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