Lates calcarifer (barramundi perch): 108882018
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Entry
108882018 CDS
T04895
Name
(RefSeq) RNA-binding protein 4.1
KO
K13187
RNA-binding protein 4
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcf03041
]
108882018
Spliceosome [BR:
lcf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108882018
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
Calcipressin
FAM153
Motif
Other DBs
NCBI-GeneID:
108882018
NCBI-ProteinID:
XP_018529748
UniProt:
A0AAJ7PKR3
A0A4W6CWG2
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Position
LG14:4219521..4225583
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AA seq
340 aa
AA seq
DB search
MVKIFIGNLSQHAGKDEVEALFTQYGTVTECAKYKNYAFVHMDDRKSATKAIRELHLYKL
NGRPINVELSRGKNQVPVKLHVANVEKGSDEELRALFEEYGTVTECSIVKDFAFVHMANS
DEAMDAIKELDNTEFQGKRIHVQISKSRPRGAPQEEAYPPPPGRGGYYPPRYPGERPEPP
YRGRMSAYPPPPPPPPLPPQRRAAYPDRGYGERDGFGVVDYYEKFRARPYGTAGYDDRRA
IPPPPPPPSALVRDRLGMGSLDPYERRPLPPAPPSYMTRDRSPIRRTPLPPAPSAGNGYS
YERSRLSPMSRTPMYAAPRPRDSFTERAPPPPPPPRYAGY
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagattttcattgggaacctgtctcagcacgctgggaaggatgaagttgaggct
ctgtttactcagtacggcacagtgaccgaatgtgccaaatacaaaaactatgcttttgtc
cacatggacgaccgcaagtcagccaccaaagccatccgagagctccatctctataagctg
aacggtaggcccatcaacgtggagctcagcagagggaagaaccaggtccctgtgaagctc
cacgttgccaatgtagaaaaggggtctgatgaggagctccgtgctctctttgaagagtat
ggcacagtcacagagtgttccattgtcaaggactttgcctttgtgcacatggccaattct
gatgaggccatggatgccataaaagaactggataacacagagtttcagggaaagcgcata
catgttcagatatcaaaaagcagacccagaggggcgccccaggaggaggcctatccgcct
ccgccaggcagaggaggctactatcctcctcgctacccgggggagaggcctgagcctccc
tacagaggccgcatgtccgcttaccctcctccgcctccgcctccaccactgcctcctcag
agacgagcagcttatcccgaccgtggctatggggagcgagacggctttggggtggttgat
tactatgagaaattcagagcccggccttatggcaccgcaggctatgacgacaggcgtgcc
atcccccctcctccgcctcctccctcggcactggttagagaccgtctcggaatggggtcc
cttgacccgtatgagcggcgcccgctcccgcctgctcctccgtcctacatgaccagggac
cgaagccccatcagacgaactcccctcccgcctgctccgtcagctggtaacgggtactcc
tacgagcggtcccggctctctccaatgtccagaactccaatgtatgcagctccccggccc
agggactcctttacggagagagcgccgccaccgccacctccacctcgctatgcaggctat
tag
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