Lates calcarifer (barramundi perch): 108882027
Help
Entry
108882027 CDS
T04895
Symbol
kirrel1a
Name
(RefSeq) kin of IRRE-like protein 1a isoform X1
KO
K25874
Kirrel/Neph family protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lcf04515
]
108882027 (kirrel1a)
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
Kirrel/Neph family
108882027 (kirrel1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
C2-set_2
V-set
C1-set
Ig_5
Ig_4
Syndecan
DUF347
Motif
Other DBs
NCBI-GeneID:
108882027
NCBI-ProteinID:
XP_018529762
UniProt:
A0A4W6D6Y9
LinkDB
All DBs
Position
LG14:complement(4077742..4108402)
Genome browser
AA seq
839 aa
AA seq
DB search
MQRLLLLSLVLSFQTVWTARFSQEPADQSVVRGQRVILSCVVFNYSGIVQWTKDGLALGI
GEDLRAWPRYRVLRVQELGQYNLEILSADLSDDSLYECQAPDAALRSRRAKLTVLIPPDD
PVIDGGPEVLLNAGESYNLSCVSRGAKPPSMIEWLKDGLPVDGAASTTEVLPDRKRVTTR
SYLPIQPVDTDTGRNYSCVATNLAIPTGKSTTVTLNVHHPPTVTLSIEPRSVLEGERVTF
TCQAHANPPIMGYRWAKGGVVLQGARESVFTTKADHSFFTEPVSCLVFNAVGKTNVSILV
DVHFGPILLVEPQPKTVDVDSDVTLNCKWAGNPPLTLTWFKKGSNMVLSNSNQLYLKSVS
QADAGQYVCKAIVPRIGVGETEVTLTVNGPPIISSDSVQYAVRGERGEVKCYIASTPPPD
KIVWAWKENVWEKEKGTLLERYTVEQSKLSAEGGGVLSTLTINNVMESDFLSTYNCTAWN
SFGPGTMIITLEETEEVPVGIIAGGTVGSTILLFIFLLVLVLIFYRQRKGSRRGVTLGKP
DIKVETINKETHSLEEDSGSVSTASRMVKAMYSFLPSVSFSPSNQPFKDDIELKSDLRSD
TLDTRQEYDLKDPTNGYYNVRASTHDEGRPASRSTMHYSDYRSPAGTPGGAASISSSAGG
SGATASGGAPGPPGPLTSPGRPQACYDPRPPSRLSHISYAQFNTFTRGGQSQQPPANPAP
TASDFPGDCSLLDSTSQLAYDNYGYPSHYQTYRMGFAPSSLAPLEAGPSYEMYGVGSGVG
SGVGSGVGGPGVGVGPGGPAPSGSETGLGKYGSSTRFSYTSQHSDYSHSRHTQRMQTHV
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggctgctgctcctgagtttggtgttgagttttcaaactgtgtggacagcgagg
ttctctcaggagccagcagaccagtcggtggtgcggggccagagggtgatcctgtcctgt
gttgtcttcaactactcgggcattgttcagtggaccaaagatggcctggctctgggcatt
ggagaagacctgcgggcctggcccaggtaccgtgtgctgcgtgtgcaggaactggggcaa
tacaacctggagatcttgtcagccgatctgtctgatgactccctgtacgagtgtcaggcc
cccgatgccgcgctgaggtccaggagggccaaactcaccgtcctcatccccccagacgac
ccggtgattgatgggggtccggaggtgttgctgaatgcgggggagtcctacaacctcagc
tgtgtgtctcgaggggctaaaccgccttctatgatcgagtggcttaaagatggtctgcct
gtggacggggctgccagtaccactgaggtgcttccagacaggaagcgagtgaccacacgt
agctacctgcccatccagccggtcgatactgacactgggaggaactacagctgtgtggcc
accaacctggctatccccaccggcaaaagcacaaccgtcaccctcaacgtccaccatcca
ccgacagtgaccttgtccattgagcctcgctctgtcctggagggggaaagagtcaccttc
acctgccaggctcacgccaaccctcctattatgggctacaggtgggctaagggtggtgtg
gtgctgcagggtgccagggagagcgtgttcaccacaaaggccgaccactccttcttcacc
gagcccgtctcctgtctggttttcaacgccgtgggaaagaccaacgtcagcatcctggtg
gacgttcacttcggtccaatcctgttggtggagccgcagccaaaaacagttgatgtcgac
tctgatgtcaccctcaactgcaaatgggctggaaaccctccgctcacgctcacctggttc
aaaaagggttcaaacatggttctgagtaacagcaaccagctgtatctgaagtcggtgagc
caggcggatgccggccagtatgtatgtaaggccatcgtcccacggattggagtaggagag
actgaggtcacgctcacagtcaacggtcctcccatcatctccagtgattcagtccagtat
gcagtaagaggggagagaggagaggtgaagtgctacatagccagtacacctcctccagat
aagattgtgtgggcgtggaaggagaacgtgtgggagaaggagaaggggacgctcctggag
aggtacacggtggagcagagcaaactgtcggccgaaggcggcggagtcctctctaccctc
accatcaacaacgtgatggagtccgacttcctgtccacctacaactgcacggcttggaac
tcattcggccccggcaccatgatcatcacactggaggagactgaggaggtcccagtggga
ataatagctggtgggacagtgggctccacaatcctcttgttcatctttctgctggtcctt
gttcttatcttctaccggcagcgcaaaggcagtcggcgcggggtcacgctgggtaagccc
gacatcaaggtggagacgataaacaaggagacccacagcttggaggaggactccggcagc
gtgtccacggcttcgcgcatggtcaaggccatgtactcgtttctcccctctgtgtccttc
tctccctccaatcagccctttaaagatgacatagagctcaagtccgacctccgcagtgac
accctggacacccgccaggagtatgacctaaaggaccccaccaatggctactacaacgtg
cgagcctccacccacgatgaaggccgccctgcgtcccgctccaccatgcactactccgac
taccgctcccctgcgggaacaccagggggagctgcatctattagcagcagtgccggcggg
tcgggagccacggccagcggaggagctcccggtccccccggacccctcacctcccctggc
cgaccccaggcctgctacgacccccggcccccatccagactgtcccacatcagctacgcc
cagttcaacaccttcacccgtgggggccagagccagcagcccccggccaaccccgcgccc
acagccagcgacttcccaggcgactgcagcctcctggactctacttctcagctggcctac
gacaactacggatacccctcacattaccagacctaccgcatgggtttcgccccgtccagc
ttggccccgctggaggctggcccatcctatgagatgtacggggtgggatctggggtggga
tctggggtgggatctggggtggggggccccggtgtcggggtcggtcccgggggcccggct
ccctcgggatcagagactggactagggaagtacggcagctccactcgcttctcctacacc
tcgcaacactctgactactcccacagccgacacacacagaggatgcagactcacgtgtga
DBGET
integrated database retrieval system
