Lates calcarifer (barramundi perch): 108882033
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Entry
108882033 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein orthopedia B-like
KO
K24901
homeobox protein orthopedia
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108882033
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108882033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
108882033
NCBI-ProteinID:
XP_018529778
UniProt:
A0AAJ7LT41
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Position
LG13:complement(4972437..4979289)
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AA seq
311 aa
AA seq
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MLSHADLLDARLGMKDAAELLGHREALKCRLGGGVPDQGHPGDMAPGSDSVEGTTLLPGE
DIATVGSNSAGMPVNGKEQEKQQQQPQQSSGQSASQQKQKRHRTRFTPAQLNELERSFAK
THYPDIFMREELALRIGLTESRVQVWFQNRRAKWKKRKKTTNVFRAPGTLLPTPGLPQFS
AAAAMENSLCSFHANDSRWATGMPGVSQLQLPPALGRQPGMAQSLSQCSLGPGPPPNSMG
LSNGLSSNGSGLQSHLYQTPFPGMSASLSGPTNVSGSPQLCSSPDSDMWRGTSIASLRRK
ALEHTVSMSFT
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcacgccgacctcctggatgctcggctcgggatgaaggatgctgcagagtta
ctcggacaccgagaggctctcaagtgccggctgggaggtggggtgccagaccaggggcat
ccgggagacatggcccctggttcagactcagtagaggggaccaccctcctgccgggcgaa
gacatcgccactgtgggatccaactccgccggcatgcccgtgaacgggaaggagcaggag
aagcagcagcagcaaccgcagcagagctccggtcagtccgccagccagcagaaacagaaa
cggcaccggacgcgcttcaccccggcgcagctcaacgagctggagcgcagcttcgccaaa
acccactaccctgacatcttcatgagggaagaactggcgctgaggatcggcctcactgag
tccagagttcaggtttggtttcagaacagacgcgctaagtggaagaaaaggaagaagacc
accaatgttttccgcgccccggggacgctgctcccaacaccgggcctgccacagttctct
gccgcggccgccatggagaacagcctgtgctctttccacgccaacgactctcgctgggcc
acggggatgccgggggtctcccagctgcagctgccgcccgccctgggtcgccagccgggc
atggcacagtctctgtcacagtgcagcctgggcccgggcccgccaccaaactccatgggt
ctctccaacggcctgtcatccaacggctccggtctgcagtcccacctctaccagacgcct
ttccccggaatgtcggcctctctctccggccccacgaacgtatcgggctccccgcagctg
tgtagttccccggacagtgacatgtggagagggacaagcatcgcgtcactgcggcgcaaa
gcgctggagcacacagtgtccatgagtttcacttag
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