KEGG   Lates calcarifer (barramundi perch): 108882039
Entry
108882039         CDS       T04895                                 
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin 2b
  KO
K07377  neurexin
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    108882039
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lcf04131]
    108882039
Membrane trafficking [BR:lcf04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Others
    108882039
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 Laminin_G_3 EGF Syndecan
Other DBs
NCBI-GeneID: 108882039
NCBI-ProteinID: XP_050931672
UniProt: A0AAJ8BFP8
LinkDB
Position
LG14:complement(3252651..3862342)
AA seq 1683 aa
MTRGLRFLYWPLWPLALFSLLSTVKMLEFGGAPGQWARYGRWEAGSVGELSFSLKTNISK
ALVLYLDDGGNCDFLELLIAGGRLQLRFAIHCAEPATLHMETRVNDDRWHMVLLTRNFRE
TLLMVDGETKVAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFQGLISNLK
VGEMPPTLLNSQGIQSDLEYLCTKQNPCFNGGFCSIQYGEVHCDCTHTRFKGKYCKEAEE
YAVEGLAHLTLNDQGDSSQAGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LKDVVYKNNDFKLELSRLAIERDPKITLNGDLVFRCEDVAALDPVTFETPESYISLPKWN
TKKTGSISFDFRTTEPSGLLLFSHGRPQSPKEQKPGRELKTDYFAMELLDGYLYLLIDMG
SGKTKLKASNKKVNDGEWCHVDFQREGRKGSISVNSRSMPFSSPEGSEILDLDSDMYLGG
LPESKSDLILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSALGVSSFCTRELQ
KRCSSAPCGNGGLCKEGWNRYICDCTGTGYLGTNCEIEATVLSYDGSMYLKIIMPVTMHT
EAEDLALRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCSLSKGPEI
LFAGQKLNDNEWHTVKVVRRGKSLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFI
SVVPSNFIGHLQGLTFNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSYLAL
ATLQAYASMHLFFQFKTTTPDGLMLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGN
SDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVTKNMYSN
LPKLIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVERGCDGPSTTCTEESCYHQGVC
LQQWEGFTCDCTMTSYGGSFCNDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFST
QLKEAVLVRVESAKGLGDYLELHIERGKIGVIFNVGTDDITIEESAVMVSDGKYHVVRFT
RSGGNATLQVDNQPVIERFPSGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNS
QAFIKIGGGGETGRHFQGQISGLYYNGLQVLKLAAEGDPNVQTQGNLRLVGDVPSVLTTD
TTSTTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNADDLLVASAECPSDDEDLE
ECEPGNGGELVLPIITVDSLDPPSIATRYPVIPPPPTTYRPFLTLLETTKESLPLPNGRP
PCPLDQEDCEETIEVSAYGSGEMTESDDEDYYKNSPLVTDRTVLPPPPAVEGGVQNPRDR
HFSRFPNSHRPPLSSTPTANPDQLSPRIKPAAGGSSSSNNNIPAGKMNTRDQVLLPPAHP
SSDPGHRRVPGITYPPNFPHVPTQIPQSPERGLPGAVEVQQSSSTTGMVVGIVAAAALCI
LILLYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGALVKEKQPSTAKTVTKNKKNKDKE
YYV
NT seq 5052 nt   +upstreamnt  +downstreamnt
atgacaagggggttaagattcctgtattggcccctgtggcctctggccctcttcagcctg
ctcagtacagtgaagatgctggaatttggtggggctcctggccagtgggcacgctatggg
cgctgggaagctggatcagtgggcgaactgagcttcagtctcaagaccaacattagcaaa
gccttggtactctatctggatgatggtggcaactgtgacttcttggagctgctgatcgct
ggcggacgcctccagctgcgcttcgccatccactgtgccgagccagccactttacacatg
gagactcgggtgaatgacgaccgctggcacatggtcttgctcacccgcaactttcgcgag
acccttctgatggtggacggagagacaaaagtggctgaggttaagtccaagaggaaggag
atggcggtggtcagtgacctgtttgtgggtgggatcccacctgatgtgcgcctctctgcg
ctgacgtccagcacagtgaagtacgagccacccttccagggcttgatctccaatctcaag
gtgggagagatgccccctactttgttaaatagccagggcattcagagcgacctggagtac
ctctgcaccaaacagaacccatgcttcaatggagggttttgctctattcagtatggagaa
gttcactgtgactgcacccacacccgcttcaaggggaagtactgcaaggaagctgaagag
tatgctgttgaaggtctggcgcacctgacgttaaacgaccaaggtgactcatctcaagcc
ggtaaggaagagtcagtggccaccttcaagggcaacgagttcttctgctatgacctgtcc
ctgacgcccatccagagcagcactgacgagatcacgctgtctttccgcacgctgcaacgc
aacggcctgatgctgcacaccgggaagtcggctgactacgtaaacctttccttgaagagc
ggcgccgtctggctggtcatcaacctgggctcgggggccttcgaagccctggtggagcct
gtcaacggcaagttcaacgacaacgcctggcatgatgtgcgcgtcacccgcaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatctcagtggatggtatattgaccacc
actggttacacccaggaagactacaccatgttgggctccgatgacttcttttacattgga
gggagccccaacaccgccgacctgcccggatcaccagtcagcaacaacttcatgggctgc
cttaaagatgtggtgtacaagaacaatgacttcaagctggagctgtcacggctggccatc
gaacgcgaccctaaaatcacccttaacggtgacctggtgttccgctgtgaggatgtggct
gccctagaccccgttaccttcgagacccccgagtcctacatctccctgcccaagtggaac
accaagaagacaggctctatttcctttgacttccgcactacagagcccagcggcctcctg
ctgttcagccacggccgccctcagagtcccaaagagcagaagcccggtagggagctcaag
actgattactttgccatggagctgctggatgggtatttgtacctgctgatcgatatgggc
tctggaaaaacaaagctgaaggccagcaacaagaaggtcaatgatggtgaatggtgccat
gtggatttccagagggaagggaggaaaggatctatctcagtcaacagccgcagcatgccc
ttcagctccccagagggcagtgaaatcctggacctggacagtgatatgtacctgggcggc
ctgcctgagtctaagtcagacctcatcctgccgcccgaggtttggacggcgttgcttaac
tacggctacgtaggctgtgtccgcgatctcttcatcgacggcaagagccgcgacgtccga
cgtctggctgagatccagagtgctctgggtgtcagcagtttctgcacccgtgaactgcag
aagaggtgcagcagtgctccctgtggcaacgggggtctgtgcaaagagggctggaaccgc
tacatctgtgattgcaccggcaccggatacctgggtaccaactgtgagatagaggcgact
gtgctgagttatgacggcagcatgtacctgaagatcatcatgccggtcaccatgcacaca
gaggccgaggacttggcgctgcgcttcatgtctcagcgggcgtacggcctgctcatggcc
accacctccaaggagtcagcggacaccctgcgactggagttggacggaggccgagtcaag
ctcaccgtgaacctcgattgtatcaggatagactgtagcctcagcaaaggacctgagata
ctgttcgcggggcagaagctgaacgacaacgagtggcacacagtgaaggtggtgcgaaga
ggcaagagcctgcagctgtctgtggataatgtcacagtggaaggccagatgaccggtgcc
cacacacgtctcgagttccacaacatcgagacaggcatcatgactgagcgccgcttcata
tctgtggtgccctcaaacttcattggccacctccagggcctgaccttcaatggggtgcca
tatctagaccagtgtaaaaatggggatatctcctactgcgagctgaacgcccgcttcggc
atgcgccacatcattgcagatccggtgacgtttcgaacaaaaggcagctacttagcatta
gctacgttacaagcttatgcctccatgcacctcttctttcagttcaaaaccaccacgcct
gacggcctgatgctcttcaactctggagatgggagcgacttcattgttgtggagctggtg
aaaggctacgtccactatgtctttgatcttggcaacgggccgtcgctgatgaagggcaac
tcagacaagccactcaatgacaaccaatggcacaacgtggtggtgtcccgggacgccaac
aacgtacatacgctcaagatcgactcacgcaccgttactcagcactccaatggagcacgc
aacctggacctcaaaggggagctgtacatcggtggcgtgacaaagaacatgtacagcaat
ctgcccaaactgattgcgtcccgggacgggtaccagggctgtctggcctccgtggacctg
aatgggagactccccgacctgatcgcagatgccctccacagggtgggtcaggtggaacga
ggctgcgatggacccagtaccacctgtacggaggagtcctgctaccatcagggggtgtgt
ctccagcagtgggagggcttcacctgcgactgcaccatgacgtcctatggtggctcattt
tgcaatgaccctgggacaacgtacatcttcgggagaggcggagccctcatcacatatacc
tggccacccaatgaccggccgagcacacgggcagaccggctggcagtgggcttcagcacg
cagctgaaggaggctgttctggtcagggtagagagtgccaagggactgggagattacctg
gagctgcacatagaacggggaaagatcggcgtgatcttcaacgtgggaacggacgacata
accatcgaggagagcgcggtgatggtgagcgacggcaaataccacgtggtgcgattcaca
cgcagtggtggcaatgccacactacaggtggacaaccagcccgtcatcgaacgtttcccc
tcagggaactttgataatgagcgcctggctattgctagacaaagaatcccataccgactc
ggtcgggtagttgacgagtggctactcgacaaaggtcgccagctgaccatcttcaacagc
caggcgttcatcaaaatcggtggtggtggagagacagggcgccacttccagggccagatc
tcaggtctgtactacaacggcctgcaggtgctcaaactggcagccgagggcgaccccaat
gtccagacccagggcaacctgcggctggtgggtgacgtgccctctgtgctcaccactgac
accacctccaccaccccgctggctgacatgtccaccacaatcatggagacaaccaccacc
atggccacaaccaccacccgcaaacagcgctcgcccaccatgagggacagtgtgacacag
aatgcggatgaccttttggtagcatcagctgagtgtcctagcgatgacgaagatttggag
gagtgtgagcctggaaatggaggtgaattagtgttgcccataataacggtggactcccta
gaccccccatccatcgccacccgctacccagtaatccccccgccccccaccacctaccgc
cctttcctcaccctgctcgaaaccaccaaagagtccctccccttgcccaacgggcggccc
ccatgccccctggaccaggaggactgcgaggagaccatcgaggtgtcggcgtacggctcg
ggggagatgaccgagtcggatgacgaggactattacaaaaactcccccctggtcaccgac
aggactgtcctccctcctcccccggccgtggagggcggcgtccagaacccccgagaccgc
catttctcccgctttcccaactcccaccgcccacctctctcctccacccccacagccaac
cccgatcagctcagcccgcgcatcaagccggccgctggcggcagcagtagtagcaacaac
aacatccctgccggtaaaatgaacacccgggaccaggtgctgctgccaccggcccacccc
tcgtcagacccaggccaccgtagagtcccgggaataacctaccccccaaatttcccccat
gtccccactcagatcccacagtctcccgagagagggctcccaggcgccgtggaggtgcag
cagtccagcagcaccacaggaatggtggtgggcatcgtggcagccgccgccctctgcatc
ctcatcctgctctacgccatgtacaagtaccgcaaccgcgacgagggctcctaccaggtg
gaccagagccgcaactacatcagcaactcggccacgcagagcaatggagccctagtgaag
gagaaacagcccagcactgccaagacggtcaccaagaacaagaagaacaaagacaaagag
tactacgtctga

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