Lates calcarifer (barramundi perch): 108882039
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Entry
108882039 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin 2b
KO
K07377
neurexin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108882039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108882039
Membrane trafficking [BR:
lcf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
108882039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
108882039
NCBI-ProteinID:
XP_050931672
UniProt:
A0AAJ8BFP8
LinkDB
All DBs
Position
LG14:complement(3252651..3862342)
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AA seq
1683 aa
AA seq
DB search
MTRGLRFLYWPLWPLALFSLLSTVKMLEFGGAPGQWARYGRWEAGSVGELSFSLKTNISK
ALVLYLDDGGNCDFLELLIAGGRLQLRFAIHCAEPATLHMETRVNDDRWHMVLLTRNFRE
TLLMVDGETKVAEVKSKRKEMAVVSDLFVGGIPPDVRLSALTSSTVKYEPPFQGLISNLK
VGEMPPTLLNSQGIQSDLEYLCTKQNPCFNGGFCSIQYGEVHCDCTHTRFKGKYCKEAEE
YAVEGLAHLTLNDQGDSSQAGKEESVATFKGNEFFCYDLSLTPIQSSTDEITLSFRTLQR
NGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFEALVEPVNGKFNDNAWHDVRVTRNLR
QHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVSNNFMGC
LKDVVYKNNDFKLELSRLAIERDPKITLNGDLVFRCEDVAALDPVTFETPESYISLPKWN
TKKTGSISFDFRTTEPSGLLLFSHGRPQSPKEQKPGRELKTDYFAMELLDGYLYLLIDMG
SGKTKLKASNKKVNDGEWCHVDFQREGRKGSISVNSRSMPFSSPEGSEILDLDSDMYLGG
LPESKSDLILPPEVWTALLNYGYVGCVRDLFIDGKSRDVRRLAEIQSALGVSSFCTRELQ
KRCSSAPCGNGGLCKEGWNRYICDCTGTGYLGTNCEIEATVLSYDGSMYLKIIMPVTMHT
EAEDLALRFMSQRAYGLLMATTSKESADTLRLELDGGRVKLTVNLDCIRIDCSLSKGPEI
LFAGQKLNDNEWHTVKVVRRGKSLQLSVDNVTVEGQMTGAHTRLEFHNIETGIMTERRFI
SVVPSNFIGHLQGLTFNGVPYLDQCKNGDISYCELNARFGMRHIIADPVTFRTKGSYLAL
ATLQAYASMHLFFQFKTTTPDGLMLFNSGDGSDFIVVELVKGYVHYVFDLGNGPSLMKGN
SDKPLNDNQWHNVVVSRDANNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGVTKNMYSN
LPKLIASRDGYQGCLASVDLNGRLPDLIADALHRVGQVERGCDGPSTTCTEESCYHQGVC
LQQWEGFTCDCTMTSYGGSFCNDPGTTYIFGRGGALITYTWPPNDRPSTRADRLAVGFST
QLKEAVLVRVESAKGLGDYLELHIERGKIGVIFNVGTDDITIEESAVMVSDGKYHVVRFT
RSGGNATLQVDNQPVIERFPSGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNS
QAFIKIGGGGETGRHFQGQISGLYYNGLQVLKLAAEGDPNVQTQGNLRLVGDVPSVLTTD
TTSTTPLADMSTTIMETTTTMATTTTRKQRSPTMRDSVTQNADDLLVASAECPSDDEDLE
ECEPGNGGELVLPIITVDSLDPPSIATRYPVIPPPPTTYRPFLTLLETTKESLPLPNGRP
PCPLDQEDCEETIEVSAYGSGEMTESDDEDYYKNSPLVTDRTVLPPPPAVEGGVQNPRDR
HFSRFPNSHRPPLSSTPTANPDQLSPRIKPAAGGSSSSNNNIPAGKMNTRDQVLLPPAHP
SSDPGHRRVPGITYPPNFPHVPTQIPQSPERGLPGAVEVQQSSSTTGMVVGIVAAAALCI
LILLYAMYKYRNRDEGSYQVDQSRNYISNSATQSNGALVKEKQPSTAKTVTKNKKNKDKE
YYV
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgacaagggggttaagattcctgtattggcccctgtggcctctggccctcttcagcctg
ctcagtacagtgaagatgctggaatttggtggggctcctggccagtgggcacgctatggg
cgctgggaagctggatcagtgggcgaactgagcttcagtctcaagaccaacattagcaaa
gccttggtactctatctggatgatggtggcaactgtgacttcttggagctgctgatcgct
ggcggacgcctccagctgcgcttcgccatccactgtgccgagccagccactttacacatg
gagactcgggtgaatgacgaccgctggcacatggtcttgctcacccgcaactttcgcgag
acccttctgatggtggacggagagacaaaagtggctgaggttaagtccaagaggaaggag
atggcggtggtcagtgacctgtttgtgggtgggatcccacctgatgtgcgcctctctgcg
ctgacgtccagcacagtgaagtacgagccacccttccagggcttgatctccaatctcaag
gtgggagagatgccccctactttgttaaatagccagggcattcagagcgacctggagtac
ctctgcaccaaacagaacccatgcttcaatggagggttttgctctattcagtatggagaa
gttcactgtgactgcacccacacccgcttcaaggggaagtactgcaaggaagctgaagag
tatgctgttgaaggtctggcgcacctgacgttaaacgaccaaggtgactcatctcaagcc
ggtaaggaagagtcagtggccaccttcaagggcaacgagttcttctgctatgacctgtcc
ctgacgcccatccagagcagcactgacgagatcacgctgtctttccgcacgctgcaacgc
aacggcctgatgctgcacaccgggaagtcggctgactacgtaaacctttccttgaagagc
ggcgccgtctggctggtcatcaacctgggctcgggggccttcgaagccctggtggagcct
gtcaacggcaagttcaacgacaacgcctggcatgatgtgcgcgtcacccgcaacctgcgc
cagcacgcaggcattggacacgctatggtgaccatctcagtggatggtatattgaccacc
actggttacacccaggaagactacaccatgttgggctccgatgacttcttttacattgga
gggagccccaacaccgccgacctgcccggatcaccagtcagcaacaacttcatgggctgc
cttaaagatgtggtgtacaagaacaatgacttcaagctggagctgtcacggctggccatc
gaacgcgaccctaaaatcacccttaacggtgacctggtgttccgctgtgaggatgtggct
gccctagaccccgttaccttcgagacccccgagtcctacatctccctgcccaagtggaac
accaagaagacaggctctatttcctttgacttccgcactacagagcccagcggcctcctg
ctgttcagccacggccgccctcagagtcccaaagagcagaagcccggtagggagctcaag
actgattactttgccatggagctgctggatgggtatttgtacctgctgatcgatatgggc
tctggaaaaacaaagctgaaggccagcaacaagaaggtcaatgatggtgaatggtgccat
gtggatttccagagggaagggaggaaaggatctatctcagtcaacagccgcagcatgccc
ttcagctccccagagggcagtgaaatcctggacctggacagtgatatgtacctgggcggc
ctgcctgagtctaagtcagacctcatcctgccgcccgaggtttggacggcgttgcttaac
tacggctacgtaggctgtgtccgcgatctcttcatcgacggcaagagccgcgacgtccga
cgtctggctgagatccagagtgctctgggtgtcagcagtttctgcacccgtgaactgcag
aagaggtgcagcagtgctccctgtggcaacgggggtctgtgcaaagagggctggaaccgc
tacatctgtgattgcaccggcaccggatacctgggtaccaactgtgagatagaggcgact
gtgctgagttatgacggcagcatgtacctgaagatcatcatgccggtcaccatgcacaca
gaggccgaggacttggcgctgcgcttcatgtctcagcgggcgtacggcctgctcatggcc
accacctccaaggagtcagcggacaccctgcgactggagttggacggaggccgagtcaag
ctcaccgtgaacctcgattgtatcaggatagactgtagcctcagcaaaggacctgagata
ctgttcgcggggcagaagctgaacgacaacgagtggcacacagtgaaggtggtgcgaaga
ggcaagagcctgcagctgtctgtggataatgtcacagtggaaggccagatgaccggtgcc
cacacacgtctcgagttccacaacatcgagacaggcatcatgactgagcgccgcttcata
tctgtggtgccctcaaacttcattggccacctccagggcctgaccttcaatggggtgcca
tatctagaccagtgtaaaaatggggatatctcctactgcgagctgaacgcccgcttcggc
atgcgccacatcattgcagatccggtgacgtttcgaacaaaaggcagctacttagcatta
gctacgttacaagcttatgcctccatgcacctcttctttcagttcaaaaccaccacgcct
gacggcctgatgctcttcaactctggagatgggagcgacttcattgttgtggagctggtg
aaaggctacgtccactatgtctttgatcttggcaacgggccgtcgctgatgaagggcaac
tcagacaagccactcaatgacaaccaatggcacaacgtggtggtgtcccgggacgccaac
aacgtacatacgctcaagatcgactcacgcaccgttactcagcactccaatggagcacgc
aacctggacctcaaaggggagctgtacatcggtggcgtgacaaagaacatgtacagcaat
ctgcccaaactgattgcgtcccgggacgggtaccagggctgtctggcctccgtggacctg
aatgggagactccccgacctgatcgcagatgccctccacagggtgggtcaggtggaacga
ggctgcgatggacccagtaccacctgtacggaggagtcctgctaccatcagggggtgtgt
ctccagcagtgggagggcttcacctgcgactgcaccatgacgtcctatggtggctcattt
tgcaatgaccctgggacaacgtacatcttcgggagaggcggagccctcatcacatatacc
tggccacccaatgaccggccgagcacacgggcagaccggctggcagtgggcttcagcacg
cagctgaaggaggctgttctggtcagggtagagagtgccaagggactgggagattacctg
gagctgcacatagaacggggaaagatcggcgtgatcttcaacgtgggaacggacgacata
accatcgaggagagcgcggtgatggtgagcgacggcaaataccacgtggtgcgattcaca
cgcagtggtggcaatgccacactacaggtggacaaccagcccgtcatcgaacgtttcccc
tcagggaactttgataatgagcgcctggctattgctagacaaagaatcccataccgactc
ggtcgggtagttgacgagtggctactcgacaaaggtcgccagctgaccatcttcaacagc
caggcgttcatcaaaatcggtggtggtggagagacagggcgccacttccagggccagatc
tcaggtctgtactacaacggcctgcaggtgctcaaactggcagccgagggcgaccccaat
gtccagacccagggcaacctgcggctggtgggtgacgtgccctctgtgctcaccactgac
accacctccaccaccccgctggctgacatgtccaccacaatcatggagacaaccaccacc
atggccacaaccaccacccgcaaacagcgctcgcccaccatgagggacagtgtgacacag
aatgcggatgaccttttggtagcatcagctgagtgtcctagcgatgacgaagatttggag
gagtgtgagcctggaaatggaggtgaattagtgttgcccataataacggtggactcccta
gaccccccatccatcgccacccgctacccagtaatccccccgccccccaccacctaccgc
cctttcctcaccctgctcgaaaccaccaaagagtccctccccttgcccaacgggcggccc
ccatgccccctggaccaggaggactgcgaggagaccatcgaggtgtcggcgtacggctcg
ggggagatgaccgagtcggatgacgaggactattacaaaaactcccccctggtcaccgac
aggactgtcctccctcctcccccggccgtggagggcggcgtccagaacccccgagaccgc
catttctcccgctttcccaactcccaccgcccacctctctcctccacccccacagccaac
cccgatcagctcagcccgcgcatcaagccggccgctggcggcagcagtagtagcaacaac
aacatccctgccggtaaaatgaacacccgggaccaggtgctgctgccaccggcccacccc
tcgtcagacccaggccaccgtagagtcccgggaataacctaccccccaaatttcccccat
gtccccactcagatcccacagtctcccgagagagggctcccaggcgccgtggaggtgcag
cagtccagcagcaccacaggaatggtggtgggcatcgtggcagccgccgccctctgcatc
ctcatcctgctctacgccatgtacaagtaccgcaaccgcgacgagggctcctaccaggtg
gaccagagccgcaactacatcagcaactcggccacgcagagcaatggagccctagtgaag
gagaaacagcccagcactgccaagacggtcaccaagaacaagaagaacaaagacaaagag
tactacgtctga
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