Lates calcarifer (barramundi perch): 108882103
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Entry
108882103 CDS
T04895
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108882103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcf03021
]
108882103
Transcription machinery [BR:
lcf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
108882103
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Red1
Motif
Other DBs
NCBI-GeneID:
108882103
NCBI-ProteinID:
XP_018529910
UniProt:
A0A4W6DDP2
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Position
LG6:20080276..20082328
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AA seq
205 aa
AA seq
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MADPARIKAEGTSERTPSATEEHPKSEETEDVAATAKPTHENKDSSLQDQSKQEAKPDTA
AGEDEEEGTSGQPPSKRLKVEPEKKKEKRHKVDEDEIQKMQVLVSSFSEEQLNRYEMYRR
SAFPKAAIKRLIQSITGSSVSQNVVIAMSGIAKVFAGEIVEEALDVCEKWGDTPPLQPKH
MREAVRRLKSRDQIPNTKYKNILFH
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccctgcgcggatcaaagctgagggtacatccgagaggacgccttctgctacc
gaggagcatcccaaatcagaggaaactgaagatgtagctgccacagccaaacccacacat
gaaaacaaagactcgtccttgcaagatcagtccaaacaggaggctaaacctgacacagca
gctggagaagatgaggaagaaggaacctctggccagcccccttccaaaagattgaaggtg
gaaccagaaaagaagaaggagaagcgccacaaggtcgatgaggatgaaatacaaaagatg
caggttctggtgtcgtccttttctgaggagcagctgaatcgctatgagatgtacagacgc
tctgccttccctaaggctgctattaagaggctgatccagtccataacaggatcatcagtg
tcccagaatgtagtgattgccatgtctggtattgccaaggtttttgctggagaaatcgtt
gaggaagcactggacgtttgtgagaagtggggagatacaccacctcttcagcccaaacat
atgagggaagcagtgaggagattgaagagccgagatcaaattcccaacaccaagtataag
aacattctctttcactga
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