Lates calcarifer (barramundi perch): 108882128
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Entry
108882128 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: semaphorin-6A
KO
K06842
semaphorin 6
Organism
lcf
Lates calcarifer (barramundi perch)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
108882128
NCBI-ProteinID:
XP_018529954
UniProt:
A0AAJ7LTC0
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Position
LG13:complement(5248398..5352932)
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AA seq
1027 aa
AA seq
DB search
MRSEALLLYFTLLQIAGAGFPEDSEPISISHGNYTKQYPAFVGHKPGRNNTQRHKLDIQL
IMIMNRTLYIAARDHIYTVDTDTANSDEIFFSKKMTWKSKQADVDTCRMKGKHKDECHNF
IKVLLQQNDETLFVCGTNAFNPACRTYKMDTLEALGEEISGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVNYGDFIYFFFREIA
MEYNTMGKVVFPRVARVCKNDRGGSPRVLEKQWTSFLKSRLNCSIPGDSHFYFNILQAVT
DVIHINGRDVVMATFSTPYNSIPGSAVCAYDMVEVANTFTGRFKEQKSPDSTWTPFPEEK
VPKPRPGTCAGTPPMERYKVSNEFPDDTLNFIKMHPLMDEAVPSIANRPWFLKTMVRYRL
TRIVVDNEAGPHKNHTVVFLGSEKGIILKFLAKMNNGFLNDSLFLEELNVYNPDKCSIDG
VEDKRIIGMQIDSKSHALWVAFTSCVVKVPLSRCERHGKCKKSCIASRDPYCGWVSEGAC
RQVVGNTKSAFEQDVEHGNTDGLGDCQNTFVALNDNPSSYEGHHHHHHHHTLSLPTSALP
EAAEGPLGRGRMVERKDPPMSSDKGEEPYVAVPSQTQPEANGVIRESYQKGRDQLVPVTL
LAIAVILAFAMGAIFSGIIVYCVCDHRRRDMDLTGRKEKDSHHLHSRRGSMNSVTKLTGL
FETQAKDGRPEAILTPLMHNGRMTPNGKMLIKADQHHLDLAALPTPESTPMQPRRKPSRG
SREWERNQNLINACTKDMPPMGSPVISDLPLRASPGHIPSVVVLPLPQHQHQLQPHLQQH
QQSYQHEYVEQPHHSDLSMGHGVVDDQGATLEYKTVKSPCHNLNMVDPDGVLPPRVPQRE
ASLTIPPAVPQMGKRLEVHSSVYGLRKGSASAASGSSVLKKHNTNSSNSSHLARHHSFNR
VETPPPAPQRVDSIQMTAQGISLSRQPGMSSYGSLPRTGIKHLKPDVPPKPSVVSLSTKV
KSSDSCT
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaggccttgttactctacttcacgctactgcaaatagccggggcgggcttc
cccgaagacagcgagcccattagcatctcacacggcaactacacaaagcagtatccagcg
tttgtaggccacaaacctggcaggaacaacacacagcggcacaaactggacatccagctc
attatgatcatgaacaggacgttatacatcgctgccagggatcacatatacacggtggac
acagacactgccaacagtgacgagatctttttcagtaagaaaatgacatggaagtccaaa
caggcagacgtggacacttgtagaatgaaggggaaacataaggatgagtgtcataatttc
atcaaagtcctactgcagcaaaatgatgagaccttgtttgtttgcggaacaaatgctttc
aacccggcctgccgaacctacaagatggacaccttggaggctctgggagaggagatcagc
gggatggcacgctgtccatatgatgccaagcatgccaacgttgccctgttcgccgatggc
aagctgtactcggccaccgtaacagactttctagcgatcgatgcggtcatctatcgtagc
ctaggagacagcccaactctgcgcactgtcaaacacgactccaaatggctgaaagagccc
tactttgtccaggcagtcaattatggggacttcatctactttttctttcgggaaattgcc
atggagtacaacacaatgggaaaggtggtgtttccccgagtggccagggtttgcaagaac
gaccgcggtggctcacctcgcgtcttggagaagcagtggacctccttcctcaagtcccgg
ctgaactgctccatccctggcgactcccacttctacttcaacattctgcaggctgtgaca
gatgtcatccacatcaatgggagggatgtagtgatggcgactttctccacaccttacaac
agtattccaggctcggcagtgtgcgcctatgacatggtggaggtggccaacacgttcaca
gggcgtttcaaagagcagaaatctccagactccacctggacgccttttcctgaagagaag
gttcccaagccaaggcctggcacctgtgccggcactccaccaatggagaggtacaaagta
tccaatgagttccctgacgacacactcaacttcatcaagatgcatcctctgatggacgag
gccgtaccctccattgctaacaggccctggttcctcaagaccatggtccggtatcgtctg
acgcgcatcgtggtggacaatgaggctggtccccataagaaccacacagtggtcttcctg
ggatctgagaaaggcatcattctaaagttcctggccaagatgaacaacggcttcctcaat
gacagcctgtttctggaggagctcaacgtctacaaccctgacaagtgcagtatagatggt
gtggaggacaagcgcatcattggtatgcagatagacagcaagagtcatgctttgtgggtc
gctttcacctcctgtgtggttaaagtgccattgtctcgctgcgaaagacatggaaaatgc
aagaagtcctgtattgcctccagagacccatactgtggttgggtatcagagggagcctgt
agacaggttgttggcaacacaaaatcagcctttgagcaggacgtggagcatggtaacaca
gatggcctgggagactgccaaaatacctttgtggcactgaacgacaatccttccagttac
gaaggccaccatcaccaccaccatcaccacaccctctcactccccacctcggcccttccc
gaggccgctgagggccccctggggcggggccgcatggtggagcggaaggaccccccaatg
agctcagacaaaggggaggaaccctacgtggccgtgccctctcagactcagcccgaagcc
aatggtgtgatccgtgagagctaccagaagggtcgcgaccagctggttcccgtgaccttg
ttggccatcgccgtcatcctagcatttgccatgggcgccatcttctctggcatcattgtc
tactgtgtctgtgaccaccggcggcgagacatggacctgacaggccgcaaagaaaaggac
agccaccacctccactcccgccggggatcaatgaacagtgtgactaagctgacgggcctg
tttgagacgcaggccaaagacggccgccctgaggcgatccttacccctttgatgcacaac
gggagaatgacaccaaacgggaagatgctgataaaagcagaccagcaccacctggacctc
gctgctctgccaacgcctgaatccacccccatgcagccacgtcgcaagcccagccgggga
agccgcgagtgggagaggaaccagaacctcatcaatgcttgcaccaaggacatgccacct
atgggctcccctgtcatatcagatctgcccctgagggcgtcaccggggcacatccccagc
gtggttgtcctgcctctgccgcagcatcagcaccagcttcagcctcacctgcaacagcac
cagcagtcgtaccagcacgaatacgtggagcagccacaccatagtgacctgagcatgggc
cacggcgtcgtggatgaccagggggccaccctggagtacaagacagtaaagagcccatgt
cacaacctcaacatggtggatccagatggggtgctgccgcctcgtgtgccccaacgagag
gcctctctcaccatcccccccgccgtcccacagatgggcaaacgtttagaggtccactcg
tcggtttacggcctccggaaaggatcggcatccgctgcctccggatcctccgtcctcaag
aagcacaacaccaactcatctaactcctcccatttggcgagacatcacagcttcaaccgt
gtggagactccaccacctgcacctcagagggtggactccatacaaatgacagcacagggc
atatctctgtcacggcagcctggaatgagctcctacggttcactgcctcgaacgggcatc
aaacatctcaagcctgatgtccctcccaaaccctccgtagtgtcactctcaacaaaagtc
aagtccagtgactcctgcacatag
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