Lates calcarifer (barramundi perch): 108882154
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Entry
108882154 CDS
T04895
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108882154 (ccdc187)
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
Others
108882154 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
108882154
NCBI-ProteinID:
XP_050927309
UniProt:
A0AAJ8B7D0
LinkDB
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Position
LG6:21076674..21108813
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AA seq
823 aa
AA seq
DB search
MNLKAHLFSSSTTPSSASPAICQCFAVLEDGVLAHNLQEQEIEQYYTTNIQKNQLVQNDI
RVAKRLQDEEEEQRAQQNAVLRQASRQLEEEDFEYARVIQEEIQRCAEEAQRREQDDEEI
AKRMQEEEEQRIMRRNRGQEGHSEGRAPDPALPSPHQHTLSSPHQGEEQYPPASTRWQYS
TSHNHSDLSGPWAASPRGLAAQNNTNSWSNQGHTDSIRQIRSEMREPLSEDSEDSDTVFS
EQLAILSQRLKRLNTAPPQRRASLHYPQERNYRSLCSRSSFTDELRSWEEEGRGEWEEDY
YDNDYYDREKRRPRIWDQESYHIEEYEGCRRSRDQDRESRTVEVRERRCSRSESVRLHDR
SRHSNRDLVRTWSYKDNPDKHVRFQDDTRRQQDESSQVWEMLGQVLKERGVPVRFGGNGA
PLQIRPQSRHSQVLHGSEVSCCDSQPHQRAFQRAANTRHSFHGDIRERRRSSHREIGGRD
HREDRDRHRANVEHDGEVCEISRRDSYLANRERGGSRRWRNHQYTDNEEREGVRDANDHR
VKRTTSQRRCWHKTTEQRLISEEEQEVERRVEWPPRRAPRRSQSLSSSGASTRNRSRRMA
AGVSLQPELGETSLDLGELEQVLQDEELARKLQEEEESLVRRNSQPSLSSSYPEGDFRAA
QVAQDEEIARFMQKQELKSKRRSRELEGPASWREHRAMISHHERRAARERQVQRERLDSE
GLPSPTEDCSPENQPPSPISTLPQAQQIRNIAEELDPTFQARRQDTESFRLGQTGPACQA
PPIPHSGLHDFLEEPNFIPPTKRQTEKSARTKPKEKKENCKQQ
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaaggcccatttgttctcatcatccacgacaccatccagtgcatcacctgct
atatgccagtgttttgctgtcctggaggatggagtgttggcacacaacctgcaggagcag
gagatcgagcaatactatacaaccaacatccagaagaaccagctagtgcagaatgacatc
cgtgtagccaagaggctgcaggatgaggaggaggagcagcgggcccagcagaacgccgtc
ctcagacaggcttccagacaactagaagaggaagactttgagtatgcccgtgtaattcag
gaggagatccagcggtgtgctgaggaggcccaaaggagggagcaggatgatgaggaaata
gcaaaacgaatgcaggaagaggaggagcagaggatcatgaggaggaacagaggacaggag
ggccatagtgaaggcagggcccctgatccagcactgccatccccacaccagcacacactc
agcagccctcaccaaggagaggagcagtacccacctgcttccaccaggtggcaatattct
acctctcacaaccattcagacttatctgggccttgggctgcctcccctaggggactagca
gctcagaataatacaaattcatggtcaaatcaaggacacacagattccattaggcaaatc
aggagtgagatgagagagcctttgagtgaagattcagaggactcggacacagttttctct
gaacaactcgctatcttgtcccagagactgaaaagactcaacacagcacctcctcagcgg
cgggcctctttacattatccacaagagagaaactacagaagtctttgctctcgcagcagc
ttcacagatgagctcagaagctgggaggaagaggggagaggagagtgggaggaggactat
tatgacaatgactattatgaccgagagaagaggaggcctaggatttgggatcaggaaagt
taccacatagaggaatatgagggctgccgcaggagcagagatcaggacagagagtctagg
acggttgaggtaagagaaaggcggtgtagtcgcagtgaatctgtcaggctacatgacagg
agtagacacagcaacagagacttagtaaggacctggagctataaggacaaccctgacaaa
catgtccgctttcaagacgataccagaagacaacaggatgaaagcagccaagtctgggag
atgctaggccaggtcctcaaagagaggggtgtgcctgtgaggtttggtggcaatggggcg
ccgctgcaaataaggcctcaaagcagacacagccaggtgcttcacgggagtgaggtctcc
tgctgcgactcccaaccacatcagagagccttccagagagctgcaaacaccaggcacagt
ttccatggagatatcagggaaaggaggagatcgtcacaccgagagatcggtgggagagat
cacagagaagacagagacaggcaccgtgctaatgtggagcatgatggagaggtttgtgag
attagtagaagagactcatatcttgctaacagagaaaggggaggcagtagaaggtggaga
aatcaccagtatactgataatgaggagagggagggggtgagggatgcaaatgatcacagg
gtcaagaggacaacaagccaacgcaggtgttggcacaagaccacagaacaaaggttaatc
tcagaggaggagcaggaggtggagaggagagtagagtggccccctcgaagagctccacgg
cgtagccaaagcctcagcagcagtggggcttcaaccaggaataggtcaaggcgcatggca
gcaggagtgtcactacaaccagagctgggtgagacaagcctggaccttggggagttggag
caggtcctacaagatgaagaactagctcgcaagctacaggaggaagaggaaagcctggta
aggaggaactcccagccctctctaagtagttcttacccagagggagacttcagagcagca
caggtggcacaggatgaggaaattgcacgttttatgcaaaagcaggaacttaagtcaaag
cgcagatctcgtgagttagaagggccggcgtcctggcgtgagcacagagcaatgatcagt
caccacgagagacgagctgcaagagagagacaggtccaacgagaaagacttgactcagag
ggccttccttcccccactgaggactgctccccagagaaccagccacctagtcccatctcc
accttaccacaagcccagcagatcagaaacattgcagaggagctggacccgaccttccag
gccaggaggcaagacacagagagcttccgactgggacaaacaggtccagcctgtcaggcg
ccccccataccgcactccggtttacatgacttcctggaggagcccaacttcatcccaccc
acaaagcggcaaactgaaaagtcagcacgtactaaaccaaaagaaaagaaggaaaattgc
aagcaacagtaa
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