Lates calcarifer (barramundi perch): 108882165
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Entry
108882165 CDS
T04895
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108882165
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
108882165
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
108882165
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
108882165
NCBI-ProteinID:
XP_018530014
UniProt:
A0A4W6DPU0
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Position
LG6:21237162..21240432
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AA seq
573 aa
AA seq
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MKIVTWNINGIRTFRGGIKQALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSYSR
GRSGYSGVATYCKDSATPFAAEEGLSGLLTNHEGAVGCYGDHAEFSNEELQLLDNEGRAI
ITQHRIMCQDKVQTVTVINVYCPRADPEKPERKQFKLHFYKLLQGRAEAILKDGSHVIVL
GDVNTSHRQIDHCDPSDNDDFGENPGRKWLNSFLHSGKPEEDRDEEEPDGESVHGGKFVD
TFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADCQLAEEQFVAADIMPEVEGSDHC
PVWGQLSCPLLPSSKPPPLCTRYLPEFAGKQQKLSRFLVKVDQKSLQSEQRDALPGSQEE
EERRENVNPCGAGNISGKKRVLTSDSVAPKGKKTKTVKTSSKPQGSLLSFFKPKLTNVVP
PTEAPVRQCEKTLHLDEMTPTQNSPKASTTTENGRVLEDTESVFDGCPQTCASSTVEKPD
KHTVTKLPQSIPQPTVRHPNANKGASLVFWKSVLHGPPPPPSCKVHGEPCVLRTVKKEGP
NMGKQFFVCARPQGHASNPEARCNFFAWVDKGK
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgttacctggaacataaacggcataaggactttcagaggcggcatcaaacag
gctcttgattcactagacgcagatattatctgcgttcaggagacaaaagtgacgagagac
ctgcttgacgaaagaacggccattgttgacggctacaactcctatttcagctacagtcga
ggacgcagcggttattcaggggttgccacttactgtaaggacagtgccactccttttgct
gctgaggagggtctctcgggtctgctgaccaaccacgaaggggctgttggatgctacggt
gaccacgctgagttttcaaatgaggagctgcagcttttggacaatgaaggacgagccatc
atcacacagcacaggatcatgtgtcaggacaaagtgcaaactgttactgtaatcaatgta
tactgtccgcgggctgaccctgagaagccagagcgaaaacagttcaaactgcacttctac
aagctgcttcaaggtcgggctgaggctattctgaaagatggcagccatgtgattgttcta
ggagatgtaaatacatctcaccggcaaatagaccactgtgaccccagtgataatgatgat
tttggggaaaaccctgggaggaagtggctgaatagctttttgcacagtggcaaaccagaa
gaggacagagacgaggaggagcctgatggagaatccgtccacggtggtaaatttgtggac
acctttcgctatttccacccaactcgaacaaatgccttcacatgctggtccactctcact
ggagcgcgacagaccaactatggcacacgcattgactatatattcgccgactgccagctc
gctgaggagcagtttgtggcagcagacatcatgccagaggtggaggggtcagaccattgc
cctgtatgggggcaactgagctgccctctcctgcccagctccaagcctcctcccctctgc
actcgctacctgccagagtttgctggcaagcagcagaaactctcccgcttccttgttaag
gtggaccaaaaatcacttcagtcagagcagagggatgcattacctggatctcaagaggaa
gaagaaaggagggagaatgtaaacccatgtggagctggaaacatctctggtaaaaaacgg
gtattaacatcagactctgttgccccaaaagggaaaaagacaaagacagtaaagacttct
tcaaagccacaaggcagtctcctttcctttttcaaacctaaactcacaaatgttgttccc
cctactgaagcccctgtcagacagtgtgaaaaaacactccaccttgatgaaatgacgcca
acacaaaactccccaaaagcatccacaactacagaaaatggtagagtacttgaggacaca
gagtcagtctttgatggttgcccacagacgtgtgccagcagcaccgtagagaaacctgac
aaacatacagtgacaaaactgccacagtcaatcccacagcctactgtacgacacccaaat
gccaacaaaggggcatcgctggtgttttggaagtcagtgcttcatggaccacctccacca
ccttcatgtaaggtccatggagaaccctgtgtgcttcgtactgtaaaaaaggaggggcca
aacatgggcaaacagttctttgtgtgtgcccgtcctcagggacatgcctctaacccagag
gctcggtgtaatttctttgcatgggttgacaaggggaagtga
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