Lates calcarifer (barramundi perch): 108882168
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Entry
108882168 CDS
T04895
Name
(RefSeq) actin nucleation-promoting factor WAS isoform X1
KO
K05747
Wiskott-Aldrich syndrome protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04520
Adherens junction
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108882168
04530 Tight junction
108882168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108882168
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108882168
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108882168
Membrane trafficking [BR:
lcf04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
108882168
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
WASP / WAVE
108882168
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
EVH1 / WASP homology (WH) domain-containing proteins
WH1 domain-containing proteins
108882168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH1
PBD
WH2
bMERB_dom
Motif
Other DBs
NCBI-GeneID:
108882168
NCBI-ProteinID:
XP_018530018
UniProt:
A0A4W6DTG6
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Position
LG6:21252165..21256304
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AA seq
545 aa
AA seq
DB search
MSRGSKSKTESVQSALLSPQENEKLEDLLGRRCASVATAVAQLFMALPNSPNVWSFQHTG
VVCFVKDNPQRSYFIRMFDLKAGRQVWEQELYNQIVYSSPQPYFHTFPADECQVGLNFAE
QQEAAAFKNAVDEKINQRHNRQDKKQRPLPPTDRGSLPPPPPGNASSLSPGSFRMATVDI
QNPDIQSSRYRSVPTPAAASISSKEKKKDKKSKKKGPKLSKADIGAPSGFKHVTHVGWDP
NNIDPDLWKLLSQAGIGEADMRDEKTSQLIYNVIEQSGGMEAVKREVNKASGPPPPPPGR
QGPLPPLPGSSPSSAPTPPPPRGRSGPLPPIPGQPQRGSPSTPSSSGRGGLPPPPPPSNR
GGPPPPPPPAHSQFPSPPPSKFSHAPPPMSSHSAPPPPPPSGPQRSMGFPPPPVPSTPSR
GGGGGGGAAPPPPPPPPPPPPALMSSDFPPPPPLSNGPPPPPPASSGGGGGDSRGALLDQ
IRLGKKLRNVTENPDPAPPASPASEEGIVGALMMVMQKRSKVIHSSDESEDEGGEEDEDD
DEWDD
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtggatctaaaagtaaaacggagagcgtccagagcgctctgttgagcccgcaa
gagaatgagaagctggaggacctgctgggcagaaggtgtgcttctgtggccaccgcagtc
gcacagttgttcatggctctgcccaacagtcctaacgtgtggagctttcagcacactgga
gtggtgtgcttcgtcaaagacaaccctcaacgttcctacttcatacggatgtttgatttg
aaggcagggaggcaggtttgggagcaggagctctacaaccaaattgtttactcctcacca
caaccatactttcatacatttcctgcagatgagtgtcaggtgggactgaactttgctgag
caacaggaggcagcggcctttaaaaatgctgtcgatgagaaaatcaaccaaagacacaac
cgtcaagacaaaaaacagcgccctctgccgcccactgacagaggttccctgcctccaccg
ccacctggaaatgcctcatctcttagccctggatcttttcgcatggccacagtggacatc
cagaacccagatatccagtcttcacgctaccgctcggtgcctacgcccgctgctgcatct
ataagcagcaaagaaaagaagaaggacaagaagagcaagaaaaagggccccaaactctcc
aaagcagacatcggcgctcccagcggattcaaacatgttactcacgtcggatgggatcca
aacaacattgatcctgatctatggaagctgctctcccaagctggaatcggtgaagctgat
atgagggatgaaaagacctcccagctcatctataatgtcattgagcagtctggaggcatg
gaggcagtcaaaagggaggtgaacaaagcctctggacctccaccccctccacctggcaga
caagggcccctacctcctctgccgggctccagtccctcctctgccccaacccctccacct
ccacgaggccgctctggccccttgcctcccatcccaggccagccacagcgagggtcccca
tccactccatcatcttcaggtcgcggaggcctgccacccccaccccctccgtcaaacaga
ggcggtcctccaccaccgccgccacctgcacactctcagttcccctcaccgcccccctcg
aagttctctcatgccccccctccgatgtcctcccacagcgcgcctcctcccccgccaccg
tctggcccacagcgctccatgggtttcccacctcctcctgtcccatctacacccagcagg
ggaggtggaggaggaggaggtgctgcacctcctcctccaccccctccacctccacctcca
cctgctctgatgtcctcagacttcccaccgcctcctcccctgtccaatggcccaccgcca
cctccccctgcatcctctggaggaggaggaggagacagcagaggagccctgctggatcag
atccgactagggaagaagctcagaaatgtgacagagaaccctgatccagctccacctgca
tctccagcatcagaggagggcattgttggtgctctcatgatggtcatgcagaagaggagt
aaagtcatccactcctctgatgaaagtgaagatgagggtggagaagaggacgaagacgat
gacgaatgggatgactga
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