Lates calcarifer (barramundi perch): 108882179
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Entry
108882179 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: IQ motif and SEC7 domain-containing protein 1
KO
K12495
IQ motif and SEC7 domain-containing protein
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108882179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108882179
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108882179
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec7
IQ_SEC7_PH
SOS1_NGEF_PH
PH_19
RHG20_PH
MYCBP_helical
PH
PPL5
TSC22
Motif
Other DBs
NCBI-GeneID:
108882179
NCBI-ProteinID:
XP_018530038
LinkDB
All DBs
Position
LG6:complement(21372161..21399346)
Genome browser
AA seq
1521 aa
AA seq
DB search
METSPESPNRAVEYLLELNNIIESQAKLLETQRRRIEELEGQLDRVSQENQDLRQERSPR
TPGSDTPEQNHNHSQPLSLPIHHGGSSSAGGGGGGGGGSSSGNGSASAAQATAGSATTPG
PSRERRTHTRLTRGLSCGSSTTERDRLERTDSTDTNASSTLRRNVEGESQCPETGTHKDS
SFSQTPYLRGSERYTDSSSSAPSGTRGPSCVAASSSASLAWALRTRHQPASLALRKQEEE
ENKRCKALSDSYELSTDLQDKKVEMLERKYGGSFVSRRAARTIQTAFRQYRMNKNFERLR
SSASESRMTRRIILSNMRLQYSFDERQPQQQAQTQTNFTHSVAIGPPHSPDTDRPGDYTH
LEDSFSKQVKSLADSIDDALTCRAGRDDSQEGSREGGGISEDFGECVWSSSSNPSSQRGL
GERARGAGGGLSMHGDSTATSYSDVTLYMDDGMPSSPLSLDRAPSSTDTEYWGPGGGVGG
REDSRDTEGGGSSNSRRSTPCTECRDYRLRGAHLPLLTIEPPSDSSVDMSDRSDRGSLSR
QLVYEQEPGVGAGSPQGTLKHSPNTGTRPSSTAAAQGQTRAPGRPIPTHIPHQVAAHHHH
HHHPIHHHQYPDTPSSSSSPQQPPTTPLSSSSSTALPPGGLEQPCCSDGDNDSLNSTTNS
NETVNCSSGSSSQDSLREPLPPLGKQTYQRESRHSWDSPPFNSDVVQRRQYRIGLNLFNK
KPEKGIQYLIERGFVSDTPVGIARFILERKGLSRQMIGEFLGNRQKQFNKDVLDCVVDEM
DFSGMDLDDALRKFQAQIKVQGEAQKVERLIEAFSQRYCVCNPTLVRQFQNPDTIFILAF
AIILLNTDMYSPNVKAERKMKLEDFIKNLRGVDNGQDIPRDLLVGIYQRIQKWELRTNDD
HVSQVQAVERVIVGKKPVLSLPHRRLVCCCQLYEVPDPNRPQRTGVHQREVFLFNDLLVV
TKIFQKKKTSVTYSFRQSFPLVEMQVHMFQNSYYPHGIRLTSAVLGGERKVLIVFMAPSQ
QDRTRFVSDLRESIAEVQEMEKYRVESELEKQKGVMRPSLLTGGVVGGGVGVKSDVVNGT
LGRTSFDDNCSVGEGLKRTALSSSLRDLSETGKRGRRNSVGSLDSTMEGSIISSPQPHQR
YPVPGVVPGCYGTEDFRPHRPILSPGTGVGGGPGQQHTTAGTGVGGVSSSVERAGAGSGP
GGSSNNNSGSFLGSLFGSKRAKPPGPLIPPGPPYPAPIPPLTTGGPPPHSPSSLCQLEGG
PSKIQALHAQYCHAGTVQPPPPYYHHHRYHIQTVPPPLQGVPPHTIQRGPLPCRPPLGLP
HAQHPQLAHLSQLSQHGLPGRYANMVVGCPPPLSPLSQHSQNPQFALYHAQPTHSVRGGG
GPGTKPPLTLSHSHPHPHAHSQTHPGHVHTPHPASHSTHQTHFIFGTLPHNLPSATVNAH
HAASAAPYLPQYPPLSSIPPPPPHSPLPPPSSPLTPLTPLSPHPPQHPGQPQQGPQVTGA
GATGTGGSSKSKPINRISTVV
NT seq
4566 nt
NT seq
+upstream
nt +downstream
nt
atggagaccagcccagagagccccaaccgggcagtggagtacctcctggaactcaacaac
atcatcgagagccaggccaagctcctggagacccagcggcggcgcatcgaagagctggag
ggccagctggaccgggtcagccaggagaaccaggacctgaggcaggaacgcagcccgcgg
acgcctggctcggacaccccggagcagaaccacaaccacagccagcctctgtctctcccc
atccaccatggcggcagcagcagcgccggtggtggtggtggtggtggtggtggcagcagc
agtgggaacggtagcgcctcagcggctcaggcgacggctggatcggccacaactccaggg
cccagcagggagaggaggacccacaccagactgaccagaggtctctcctgcggctcctcc
accacagagcgagaccggcttgagcgcactgacagcacagacaccaacgccagctccacc
ttacgcagaaatgtggaaggggagtcccagtgtccagagacgggcacccacaaagacagc
tccttcagtcagacgccttacctgcgcggctccgaacgctacactgacagcagcagcagc
gcaccctctggtaccaggggcccttcatgcgtggctgcctccagctcagccagcttggcc
tgggcgctacgaacacgccaccaacctgcgagtctggccctccgcaagcaagaggaagag
gagaacaagagatgcaaggccctttcagatagctatgagctctcaacagatctgcaggat
aagaaggtggagatgctggagagaaagtatggtggctcctttgtaagtcgcagagcagcc
aggaccattcagacagccttcagacagtatcgcatgaacaagaactttgagcgcctcaga
agctccgcttcagagagccgcatgacacgccgcatcatcctgtccaacatgagactgcag
tattccttcgatgagcgacagcctcagcagcaggcccagacacagaccaacttcacccac
agtgtggccatagggcctcctcactcccctgacacagaccgcccaggagactacacccac
ttagaagactccttctccaaacaggtcaagtccttagctgactcgatagacgatgccctc
acctgccgcgcaggtcgcgatgactcccaagagggcagcagggagggtggagggattagt
gaagatttcggggagtgtgtgtggagcagcagcagcaacccatcttcccaaagaggtctg
ggagagagagcaaggggagctggaggaggactaagtatgcacggcgacagtacggccacc
tcgtacagcgacgtcaccctatacatggatgatggcatgccgtcatccccgctgtccctc
gaccgagcacccagcagcacagatacagagtactggggccccggtggtggtgtaggagga
cgtgaggacagcagggacaccgagggagggggtagcagtaacagtcgacgcagcaccccg
tgcactgagtgcagggactatcgtctaaggggcgcacatttgcctctactcactattgag
ccaccaagtgacagctcagtggacatgagtgaccgttcagaccggggttctctgagcaga
cagctggtgtatgaacaggagcctggggtaggagctggctcccctcagggaaccctcaag
cactcccccaacacaggcacccgcccgtcctccacagcagctgcccagggccagactcgg
gcccctggcagacccataccaacgcacatccctcaccaggtggcggctcaccaccaccat
caccaccatcccatccaccaccatcagtaccccgacacaccttcatcctcctcctccccg
cagcagcctcccaccaccccgctgtcctcctcctcatccacagctctgccacccggcggt
ctggagcagccgtgctgctccgacggagacaacgactcgctcaattccaccaccaactcc
aacgagacagtcaactgcagctcgggctcctcatctcaggacagcctgcgggagcctctc
cctcccctgggcaagcagacctaccagagagagagccgccacagctgggactctccaccc
ttcaacagtgatgtggtgcagagacgccagtaccgcattggtctcaacctcttcaacaag
aaaccagagaaaggaatccagtacctgattgaacgagggtttgtatctgacactccagtc
gggattgctcgtttcatcctagagaggaagggcctcagcaggcagatgatcggagagttc
ctgggaaatcgacagaaacaattcaacaaagatgttttagactgtgtggtggatgagatg
gacttctcaggtatggacctggatgacgctctgaggaaattccaggctcagattaaagtt
cagggagaagcccaaaaagtggagaggctcatagaagctttcagtcagagatactgtgtg
tgcaatccaaccctggtccggcagttccagaacccggacaccattttcatcctggccttt
gctataatcctcctcaacacagatatgtacagtcccaacgtcaaagcagagaggaagatg
aaactagaggatttcatcaagaatttgagaggcgtagacaatggtcaggatatacccagg
gacctccttgttgggatctaccagcggatacagaaatgggaactacggaccaatgatgac
catgtttcccaagtgcaggcggtggagagagtcattgtgggaaagaagcctgtgctgtcc
cttccccatcgtaggctggtgtgttgctgccagctctatgaggtgcctgaccccaacaga
cctcagaggacaggagtgcaccaacgagaggtcttcctctttaatgaccttctggtggtg
accaaaatcttccagaagaagaaaacctcagtgacttatagtttcagacaatctttccct
ctggttgagatgcaagtgcacatgttccagaactcatactaccctcatggtatccgcctg
acctcagcagtcctgggtggggagaggaaggttcttatcgtctttatggcacccagtcag
caagaccgcacccgctttgttagtgacctcagggagagtattgctgaagtgcaagagatg
gagaaatacagagttgaatcggagctggagaaacagaaaggtgtgatgcggcccagcctg
ctgactggaggtgtggttggaggaggtgtaggtgtgaagagcgatgttgtgaatggcacc
ctgggaaggacaagttttgatgacaactgctcggtgggtgagggtctcaaacgcacggcg
ctcagctcatctctcagggacttatcggagacagggaaacgtggtcgcaggaacagtgtt
ggttctctggacagtaccatggaaggctccatcattagcagcccacagcctcaccagcgc
tatccagtgccaggtgtggtccctggctgctacggaacagaagacttccggcctcaccgc
cccatcctgagccccggaacgggggtggggggtgggccggggcagcaacataccactgct
gggacaggagttgggggagtctccagcagtgtagagagagcaggagcggggagcggccct
ggggggagcagcaacaacaacagcggctccttcctgggctccctattcggcagcaaacgc
gccaaaccaccagggccccttattccaccggggccaccataccccgcacctatcccccca
ctgactacgggagggccccctcctcactccccttcatctctgtgccagttggaggggggg
ccttccaagatccaggcgctgcacgcacagtactgtcacgcgggcaccgtgcagccacca
ccaccttactaccatcaccatcgctaccacatccaaactgtccctcctcctttgcaaggt
gtgccccctcatactatacagagaggcccactaccctgtcgtccaccgcttggcctaccg
cacgcccagcacccgcagctggcccatctctcccagctatcccagcatgggcttccgggt
cgctacgccaacatggtggtgggatgtcccccccccctttctcctctctcccaacattcc
cagaacccacagttcgccctctaccacgcgcagcccacacactctgtcagagggggcggc
ggccctggtaccaaacctccattaaccttatctcactcccacccgcacccccacgcacac
tcccaaacccatcccggacacgtgcacacaccacacccagccagccactccacgcaccaa
acacacttcatattcggcactctgccccacaatctaccgtccgccaccgtcaatgcgcat
cacgcagcctccgccgccccgtatctgccccagtaccctcctctctcttccatcccccct
cccccaccacactcccctttaccccccccttcgtccccccttacccctcttacacctctc
tcccctcaccccccccagcaccccgggcagcctcagcaggggccacaggtgacgggggct
ggggcaacaggtacagggggcagctccaaatccaagcctatcaaccggataagtaccgta
gtatga
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integrated database retrieval system
