Lates calcarifer (barramundi perch): 108882190
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Entry
108882190 CDS
T04895
Symbol
rad21l1
Name
(RefSeq) double-strand-break repair protein rad21-like protein 1
KO
K06670
cohesin complex subunit SCC1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108882190 (rad21l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108882190 (rad21l1)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108882190 (rad21l1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
SMC_ScpA
Tnp_DNA_bind
TSC22
Motif
Other DBs
NCBI-GeneID:
108882190
NCBI-ProteinID:
XP_018530059
UniProt:
A0A4W6E2N1
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Position
LG6:complement(21548446..21553650)
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AA seq
536 aa
AA seq
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MMFLTQLLTSKRGPLAKIWLAAHWERKLTKAHVFECNLEATIRDIISPKMKIGLRTSGHL
LLGVVRIYSRKTKYLLADCNDALLKIKMAFRTGQTDMPVEEIEATLKAITLIEDFTSFDA
QLPPLSDIDVVDQFSLNQSRSEEITLKEDFGNGFLNFTDFGGESQSHQLDMSFHSLSQHG
DAFGDEDRGFDLLDFLTNSSDDAEFTDFIPERPQNENPENSLLNYQQDADQSFPVEAETP
ALTETTLLTNEEEAFALEPVAITSNSEKKRGKRKRKLIVDQAKELTSDSIREQLSDYSDL
VTPLDMAPPTEQLMQWKESGGADKLFAQPCSAVVNPQIKELFARSIFRVKYYSVSEEVEE
MRQDGQEVQRDISALTTENVSVVDSLIDTEKTHNAELTLDQMSNNQRENYSELTEEGNRS
EFTYPDLPSEDSTFVHPSRTELASTSLHTQSVLDSQDFEERRITRRAQKLLNTLKQSQSS
TDTTFSLQALCEGSTRLQAATTFFCLLVLKKQQALHLQQSTPYEDIFATPGPKFYD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgatgttcctcactcaactcctcacgtccaagcgaggacctttagccaaaatttggtta
gcagcgcactgggagcggaaactcaccaaggctcatgtatttgagtgtaatttggaagca
accatcagagacataatttctccaaagatgaaaattggtttgcggacatctggtcacctg
ctccttggcgtggtcaggatctactccagaaaaacaaagtacctccttgcagactgcaac
gatgccctgcttaaaattaaaatggcattcaggacaggtcagacagatatgcctgtggag
gagatcgaagcaacactaaaagcgattaccttgatcgaagatttcacttcttttgatgct
cagctgcctcctctaagtgacatagatgttgtggaccagttctcattgaaccagagtcga
tcagaggagatcactctgaaggaggattttgggaatggctttctgaattttacagacttc
ggaggtgagtcccagagccaccagctggatatgagcttccacagcctgagtcaacatgga
gacgcttttggagatgaggacagaggattcgacttacttgacttcctgacaaactccagt
gatgatgccgaattcaccgacttcatcccagaaaggcctcaaaatgaaaatccagagaac
tctctgctcaattatcagcaagatgctgaccaaagttttccagtggaggcagagaccccg
gcactgactgagaccaccttgcttactaatgaggaggaggcctttgcccttgagcctgtg
gccatcacttcaaattcagagaaaaagaggggaaagaggaagcgcaagttgattgtggac
caggctaaagagctgaccagcgactccatcagagagcagctctctgactattcagatctg
gtcacccctttggacatggccccaccgactgagcagctcatgcagtggaaggagagtgga
ggtgcagacaaactttttgcacagccatgttccgctgtagtaaatccacagataaaggag
ctctttgccaggagtattttccgggtgaaatattattctgtttctgaggaggttgaggag
atgcggcaggatggacaagaggttcagagggacataagtgccctcactacagagaatgtc
agcgttgtagattcattgatcgatactgaaaaaacacacaacgctgagctgactctcgat
caaatgagcaacaatcagcgtgagaattactcggagctcacagaagagggaaacaggtca
gagttcacttatccagatctcccatcagaagactccacatttgtccatccatctcgcact
gagctggcgtcaacttccctccacactcagtctgtgctggacagccaggactttgaggag
aggaggataaccaggcgagcacagaagcttctcaacactctaaaacagagccagagcagc
actgacacaacgttcagcctgcaggcactctgtgaagggagcactcgcctgcaggctgca
accactttcttctgtctcctcgtcctgaaaaaacaacaggcactccacctgcaacagagc
actccctatgaggacatcttcgccacacctggacccaagttctatgactag
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