Lates calcarifer (barramundi perch): 108882217
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Entry
108882217 CDS
T04895
Name
(RefSeq) claudin-20-like
KO
K06087
claudin
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03272
Virion - Hepatitis viruses
lcf04382
Cornified envelope formation
lcf04514
Cell adhesion molecules
lcf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
108882217
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
108882217
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
108882217
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108882217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lcf03037
]
108882217
04147 Exosome [BR:
lcf04147
]
108882217
04515 Cell adhesion molecules [BR:
lcf04515
]
108882217
Cilium and associated proteins [BR:
lcf03037
]
Other cilia and associated proteins
Stereociliary proteins
108882217
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
108882217
Exosomal proteins of colorectal cancer cells
108882217
Cell adhesion molecules [BR:
lcf04515
]
Immunoglobulin superfamily
L1 family
108882217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
108882217
NCBI-ProteinID:
XP_018530098
UniProt:
A0A4W6EJC3
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Position
LG7_1:complement(827449..832055)
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AA seq
278 aa
AA seq
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MLSAAIQILAFALALLGVLGATVATLLPNWKVSTNVWSSIMTPISQMQGLWMDCVWYSSG
VFSCTMKNSMLSLPAYLQTTRAAMVLSCMVATFGLCLASLGLKCTRWGGSHRAKGHTAIA
AGGCFILASFLCLVPASWFTNEVITAFLTTDLPESSKYQPGGALCVTFISAGFLLAGGVI
FCLSCPGKRTRRPDYASSANPDRPVLYRDEQQRRELQTERDQPKKRQNKTVQLQMDEVKQ
EKALKEKPEQDQEQRLYSSPSKLPPKDIKDSYSLQEYV
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccgccgccattcagattctggcgttcgcccttgcgctcctgggcgtcctcggc
gccaccgtagccaccctgctacccaactggaaggtgagcaccaacgtgtggtccagcatc
atgacccccatctctcagatgcagggtctgtggatggactgtgtgtggtacagctccggc
gtcttcagctgcaccatgaagaactcgatgctgtcactgccggcatatctgcagaccaca
cgagccgccatggtcctgtcctgcatggtggcgacgtttggactctgcctcgcctccctg
gggctcaaatgtacccgctgggggggcagccaccgagcaaaggggcatacggccattgct
gcaggaggctgcttcatcctggccagttttctctgcctggtcccggcgtcctggttcacc
aacgaagtcatcaccgccttcctgaccacggacctgccagagagcagtaaatatcagcct
ggaggagctctgtgtgtgacgtttatctccgctggattccttctggctggaggggtcatt
ttttgtttgtcgtgtcccggaaagagaacgagacgaccggactacgcttcctccgccaac
cctgacagaccggtgctgtaccgagatgaacagcagaggcgggagctgcagaccgagcgt
gaccagccaaaaaaaagacaaaacaaaactgtccagctgcagatggacgaggtgaagcag
gagaaggctctgaaggagaaacctgaacaggatcaggagcagagactctactcgtctccg
tccaaactccctccaaaagacatcaaggacagctacagcctccaggagtatgtttaa
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