Lates calcarifer (barramundi perch): 108882227
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Entry
108882227 CDS
T04895
Name
(RefSeq) NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcf04054
]
108882227
Pattern recognition receptors [BR:
lcf04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
108882227
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FISNA
NLRC4_HD2
NACHT
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
108882227
NCBI-ProteinID:
XP_018530116
UniProt:
A0AAJ7LT24
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Position
LG7_1:complement(881100..889484)
Genome browser
AA seq
1103 aa
AA seq
DB search
MNQSEDREEGVPPSKTTLCGEHESQTKAQSPEQQRPDSLGPGPGPDPDSSFVSMRSDRSK
GRLIDFKSGEQSDLTSCVSMKSDRSKGRLIDLKENRVLQESSEVPSGQSTEQHHTDLDSI
FMPLEENIVTFVKKELKRVQRVLSPDYDEDVLNSKEEDQTSSREAFLKITVNFLRRMKQE
ELADCLQSRTAAAVCQNKLKSNLKKKFQFVFEGISNAGNPTLLNQIYTELYITEGGTGEV
NDEHEVRQIETASRKPDRPETTIRQEDIFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFT
LDWAEDKANQDIHFTFPFTFRELNVLKEKKLSLVELVHHFFTETKEAGICRFEEFQVVFI
FDGLDECRLPLDFHNTEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPP
ECVDMVTEVRGFTDPQKEEYFRKRFRDEDQASRIFFHIKTSRSLHIMCHIPVFCWITATV
LEDVLKTREGGKLPKTLTEMYIHFLVVQSKQKNVKYDEGSGTDPHWSPETRKMIESLGKL
AFEQLQKGNLIFYESDLTECGIDIRAASVYSGVFTQIFKEERGLYQDKVFCFVHLSVQEF
LAALHVHLTFINSGVNLMSEEQSSYWLIGLFSSLWSKVFPDKPEPAHLYQSAVDKALQSP
NGHLDLFLRFLLGLSLQTNQTLLRGLLTQTGSSSQTNQKTVQYIKKKISENLSPEKSINL
FHCLNELNDRSLVEEIQQYLSSGSLSTDKLSPAQWSALVFILLSSEKDLDVFDLKKYSAS
EEALLRLLPVVKASNKALLSGCNLSERSCEALSSVLSSQSSSLRDLDLSNNDLQDSGVKL
FTAGLESPHCKLETLSLSGCLITEEGCSSLASALSSNPSHLRELDLSYNHPGDSGVKLLS
AGLEDPHWRLDTLRMDHGGPQRLRPGVRKYACELELDTNTVNRKLKLSDNNRKVTWGEDQ
SYPDHPDRFDDCPQLLCRTGLTGRCYWEVEWTEGVRISVTYRGIRRKGSSDDCLFGGNDH
SWCLSCSDGYSVRHSNIKTSLSSSSSVSNRVAVYVDCPAGSLSFYRVSSDKLIHLHTFNT
TFTEPLYPGFLIGFGSSVSLCDL
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaatcagagtgaggacagagaggagggagtccctccctctaaaaccactctgtgtggg
gaacatgagagccagaccaaagctcagagcccagagcagcagagaccagactctcttgga
cctggacctggacctgatcctgattccagctttgtgtccatgaggagtgacagatctaag
ggtcgtcttattgactttaagagtggagagcagtctgatctaaccagctgtgtgtccatg
aagagtgaccggtctaagggtcgtcttattgacttaaaagaaaacagagttctgcaggag
agctcagaggttcccagtggtcagtccaccgagcagcatcacacagacttggactccata
tttatgccgctggaggaaaacattgtcacttttgtgaaaaaagagctgaagagagtccaa
agagttctgagtccagattatgatgaggacgtgctgaacagtaaggaggaggaccagacg
agcagcagagaggcgtttctgaagatcacagtgaacttcctgaggagaatgaagcaggag
gagctggctgactgtctgcagagcagaactgcagctgcagtgtgtcaaaataaactcaag
tcaaacctgaagaagaagttccagtttgtgtttgaggggatctctaacgcaggaaaccca
acccttctgaatcagatctacacagagctctacatcacagagggagggactggagaggtc
aatgatgaacatgaggtcagacagattgaaacagcatccaggaaaccagacagaccagaa
acaaccatcagacaagaagacatctttaaagcctcacctggaagagatgaaccaatcaga
acagtgatgacaaagggagtggctggcattgggaaaacagtcttaacacagaagttcact
ctggactgggctgaagacaaagccaaccaggacatacacttcacatttccattcactttc
agagagctgaatgtgctgaaagagaaaaagttgagcttggtggaacttgttcatcacttc
tttactgaaaccaaagaagcaggaatctgcaggtttgaagagttccaggttgtgttcatc
tttgacggtctggatgagtgtcgacttcctctggacttccacaacactgagatcctgact
gatgttacagagtccacctcagtggacgtgctgctgacaaacctcatcagggggaaactg
cttccctctgctcgcctctggataaccacacgacctgcagcagccaatcagatccctcct
gagtgtgttgacatggtgacagaggtcagagggttcactgacccacagaaggaggagtat
ttcaggaagaggttcagagatgaggatcaggccagcaggatcttcttccacatcaagacc
tcacgaagcctccacatcatgtgccacatcccagtcttctgctggatcactgctacagtt
ctggaggatgtgttgaaaaccagagagggaggaaagctgcccaagaccctgactgagatg
tacatccacttcctggtggttcagtctaaacaaaagaacgtcaagtatgatgaaggatct
gggacagatccacactggagtccagagaccaggaagatgattgagtctctgggaaaactg
gcttttgagcagctgcagaaaggaaacctgatcttctatgaatcagacctgacagagtgt
ggcatcgatatcagagcagcctcagtgtactcaggagtgttcacacagatctttaaagag
gagagaggactgtaccaggacaaggtgttctgcttcgtccatctgagtgttcaggagttt
ctggctgctcttcatgtccatctgaccttcatcaactctggagtcaatctgatgtcagag
gaacaatcatcatactggttaattggacttttctcctccttgtggtctaaagtcttccca
gacaaacctgaaccagcacatctctaccagagtgctgtggacaaggccttacagagtcca
aatggacacctggacttgttcctccgcttcctcctgggtctttcactgcagaccaatcag
actctcctacgaggtctgctgacacagacaggaagtagctcacagaccaatcagaaaaca
gtccagtacattaagaagaagatcagtgagaatctgtctccagagaaaagcatcaacctg
ttccactgtctgaatgaactgaatgatcgttctctagtggaggagatccaacagtacctg
agttcaggaagtctctccacagataaactatctcctgctcaatggtcagctctggtcttc
atcttactgtcatcagaaaaagatctggacgtgtttgacctgaagaaatactctgcttca
gaggaggctcttctgaggctgctgccagtggtcaaagcttcaaataaagctctactgagt
ggctgtaacctctcagagagaagctgtgaagctctgtcctcagttctcagctcccagtcc
tctagtctgagagacctggacctgagtaacaatgacctgcaggattcaggagtgaagctg
tttacagctggactggagagtccacactgtaaattggaaacactcagtctgtcaggttgt
ctgatcacagaggaaggctgttcttctctggcctcagctctgagttccaacccctcccat
ctgagagagctggacctgagctacaatcatccaggagactcaggagtgaagctgctgtct
gctggactggaggatccacactggagactggacactctcaggatggaccatggtggacca
cagagactgagacctggtgtgaggaagtacgcctgtgaactggaactggacacaaacaca
gtgaacagaaaactcaaactgtctgacaacaacaggaaggtgacatggggagaggatcag
tcatatcctgatcatccagacagatttgatgactgtcctcagctgctgtgtagaactggt
ctgactggtcgctgttactgggaggtcgagtggacagaaggtgtccgtatatcagtgact
tacagaggaatcagaagaaaaggaagcagtgatgactgtttgtttggaggaaatgatcac
tcctggtgtctgagctgctctgatggttactctgtcaggcacagtaatataaaaacatcc
ctctcctcctcctcctctgtctctaacagagtagcagtgtatgtggactgtcctgctggc
tctctgtccttctacagagtctcctctgacaaactgatccacctccacaccttcaacacc
acattcactgaacctctgtatcctgggttcttgatagggtttggttcctcagtgtccctg
tgtgatctgtag
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integrated database retrieval system
