Lates calcarifer (barramundi perch): 108882239
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Entry
108882239 CDS
T04895
Name
(RefSeq) peroxisomal biogenesis factor 7 isoform X1
KO
K13341
peroxin-7
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108882239
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
EIF3I
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
NBCH_WD40
WDR90_beta-prop_4th
eIF2A
MIOS_WD40
Beta-prop_SPT8
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_DCAF4
WD_LRWD1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
108882239
NCBI-ProteinID:
XP_018530140
UniProt:
A0A4W6EK11
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Position
LG7_1:complement(1227562..1257940)
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AA seq
323 aa
AA seq
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MMMMKVFRSPARHGYAVEVSPFIPNRVACAASQYYGLAGCGALLVLDETESGVSLVRSWE
WSDGLFDVAWSETNEHVLVAGGGDGSLQLWDIANHSAPLRVAKEHTQEVYAVDWSQTRGE
NLIVSGSWDHTAKVWDSALSHSLTTLRGHEGVIYSTIWSPHIPGCFASASGDGTLRVWDL
KAAACRLAIPAHNAEILSCDWCKYDQNVVATGSVDCSVCVWDLRNVRQPVNQLRGHTYAI
RRVKFSPFSKTVLASCSYDFTVRFWDYSRNQPLLDTVEHHSEFVCGLDFNLHVPNQVVDC
SWDETVKIYTPACLSAGTHSTAP
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgaaggtgtttcgcagtccggcccgtcacggctacgctgtggaagtgtct
ccgttcatccccaacagagtggcctgtgctgcctcccagtactatggactagctggttgt
ggtgctcttctggtcctggatgagacggagtcaggagtctctctagtgaggagctgggag
tggagtgacggtctgttcgatgtggcgtggagtgaaaccaatgaacatgtcttggttgcc
gggggtggagacggcagcctgcagctgtgggacatagccaatcacagcgctccgctcagg
gtggccaaagaacacacacaagaggtgtacgctgtggactggagtcagaccagaggagag
aacctcatcgtctctgggtcgtgggatcacacggccaaagtgtgggactctgctctcagc
cactcactgactactctcagaggtcatgaaggggtcatctacagcaccatttggtctcct
cacatcccaggatgctttgcctcagcctcaggtgacgggacactcagagtgtgggatctg
aaggccgctgcgtgtcgattggccatcccggcacacaacgctgagatccttagctgtgat
tggtgcaaatacgaccagaatgttgtggccacaggctccgtcgactgcagtgtgtgtgtg
tgggacctgaggaacgtgcggcagcctgtcaatcaactgcgaggccacacctacgccatc
cgcagagtcaagttttctccgttcagtaagacagtgttggcgtcctgctcgtacgacttc
acagtcaggttctgggattacagcaggaaccagcctcttctggacacggtggagcatcac
tcagagttcgtctgtggattagacttcaacctgcacgtccccaaccaggtggtggactgt
tcctgggatgagacggtgaagatctacactcctgcctgtctgtctgctggaacacacagc
acagcgccttag
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