Lates calcarifer (barramundi perch): 108882250
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Entry
108882250 CDS
T04895
Name
(RefSeq) 5-hydroxytryptamine receptor 1B
KO
K04153
5-hydroxytryptamine receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108882250
04082 Neuroactive ligand signaling
108882250
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108882250
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Biogenic amine
Serotonin
108882250
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
7tm_4
Mononeg_mRNAcap
Motif
Other DBs
NCBI-GeneID:
108882250
NCBI-ProteinID:
XP_018530159
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Position
LG7_1:1404974..1412069
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AA seq
383 aa
AA seq
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MENASQLKPTPVIYGELLNISTNDTHANFTSKAEAKDTNLAFQAGLAVTLALITFATTLS
NAFVIATIYQSRKLHTPANFLIASLAVTDLLVSILVMPISALYTVSQTWTLGQVVCDIWL
SSDITCCTASILHLCVIALDRYWAITDAVEYSKKRTPARAAGMIATAWVIAISISLPPFF
WRQVKAEEVTSCNVNTDHIFYTIYSTFGAFYIPTLLLIALYGRIYVEARKRILKQSHNKP
GKRLTSAHLITNSPGSVASTTSLNYGTNDTSSCDTTSSANVSQVKVTVSDALLEKKRISA
ARERKATKTLGIILGAYIICWLPFFIYTLLVPVCESCFHPELFDIFTWLGYLNSLINPII
YTMSNEDFKQAFHKLIRFRCCRA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgccagtcagctcaaaccaacgccggtcatctacggagagctgttgaacatc
tccaccaacgacacccatgccaatttcacgtcgaaagcggaggcgaaggacactaacttg
gctttccaggcgggtctagcggtgaccttagccctcataactttcgctacgacgctttcg
aacgcgttcgtcatcgccaccatttaccaatcccgaaaattacacaccccggcaaacttt
ctgatcgcgtccctggcggtcacggacctcctggtgtccattttggtgatgcccatcagc
gcgctgtacaccgtgagccagacctggactctggggcaggtcgtctgtgacatctggctc
tcctcggatataacgtgctgcaccgcgtccatcctccacctgtgcgtaattgcgctggac
cgctactgggccatcacggacgcagtggagtactccaagaagcgcacgccggcgcgcgcg
gccgggatgatcgccaccgcctgggtgatcgccatctccatctccctgccgccgttcttc
tggcgccaggtgaaagcggaggaggtgacgagctgcaacgtgaacaccgaccacattttc
tacaccatctactccaccttcggcgctttctacatccccacgctgctgctcatcgccctg
tacgggaggatttacgtggaagcccgaaagcgcatcctgaagcagtcgcacaacaagccg
gggaagagactcacctcggcgcacctgatcaccaactcccccggctcggtggcgtccacc
acctccctgaactacgggacgaacgacacctcctcctgtgacactacctcgtccgcgaac
gtgagccaagtcaaagtcactgtgtccgacgcgctgctggagaagaagcggatctccgcc
gccagggagaggaaggccaccaaaactttgggaataatcctcggagcctacatcatttgc
tggctcccgtttttcatttacactctcctagtgcctgtgtgtgagtcctgcttccacccg
gagttatttgacattttcacctggctgggttacctcaactccttaatcaaccccatcatt
tacaccatgtccaacgaggacttcaagcaggctttccacaaactaatacggtttagatgc
tgcagggcatga
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