Lates calcarifer (barramundi perch): 108882276
Help
Entry
108882276 CDS
T04895
Name
(RefSeq) phosphofurin acidic cluster sorting protein 1
KO
K23294
phosphofurin acidic cluster sorting protein 2
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108882276
Membrane trafficking [BR:
lcf04131
]
Autophagy
Other autophagy associated proteins
ER-mitochondria tethering complex
108882276
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pacs-1
Motif
Other DBs
NCBI-GeneID:
108882276
NCBI-ProteinID:
XP_050926208
UniProt:
A0AAJ8B6G9
LinkDB
All DBs
Position
LG5:401194..412036
Genome browser
AA seq
884 aa
AA seq
DB search
MMAAAADRGAVRGGAFPPGPVVTAAEPEVVSGPGAAGETDGRVPVPMNLFATWEIDRSSP
SCVPRLCSLTLKKLMVLRELDKELSSVVIAVKIQGSKRTLRSNEYLLPPDGLMETDLELT
FSLQYPHFLKRDANRLHVMLQRRKRYKNRTILGYKTLAVGVINMAEVMQHPTDGAHVLGL
HSNLKDASVRAAELSVLSLSSQPIEQEDTSGHHGNKTKASDRSPDMENYWEDDDDSFSSE
QEGSDDAVQPQDMYDDDDDVQGKTKKSHRKMIRTTSLTQQPNFKQKFVALLKRFKVTDEV
LDSDPVGQSQEVEEDLDLLYDSLEVYNPSDSGPELDDNDSILSTPKPKLRPFFEGISQSS
SQTDIGSLHSQRSQHRERPAAVSFWTLSLSLTHTHRHRFFFCCCILFLFSPQEVEDDVAM
GTDAGPAAKLCKTESQTHMSPSKTGSQVSRHPWSVSMKDRQNSRGTDRTSSVDSETSADY
RIPPPQVARKSVLDQLNHILFSDDQIPDTITLINTTDWQGQYLSEVLFDQPIVCTVSAAD
VQAAFSAIISRIQRFCNCNSQTPPTVKVAVGGDQSYLSTVLCCFVEQLASKTPDWLNYVR
FLVLPVGAHPLAKYLASLDAKFNSLFMDAGWRELFGRLEPPPLDPVGVAGRVSQYLSGAA
VSHLCPISEAMLTCKHKSPDDDSCQKFVPFIGLVKVGVVEQNFLSTSVDSDDIILGSPPS
QSGAPISITSTPPPSPSISCPGEVMGLQVDYWSNQGGGGGGGGGGGAGERRKEVGMKNTL
KSNFRSLQVSRISGGELMSMTVVTKEKNKKVMFLSKKTKEKEAESRSQLIEGISRLICTS
KHQHTLRVSVDGVEWNDVKFFQLAAQWPTHVKHFPVGIFSYNKP
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggcggctgcggacagaggagcggtccgggggggcgctttcccgccgggtccg
gtggtaacggcggcggagcccgaggtggtgtccggtcccggtgctgccggagagactgat
ggccgcgtcccggtgccgatgaacctgttcgccacctgggagatcgaccggtcctcaccg
agctgcgtgcccaggttgtgtagcctgactctgaagaagctgatggttttgagggagttg
gacaaagagctcagctccgtcgtcatcgctgttaagatccagggctctaaacgaactctg
agatccaacgagtatcttcttcctccagacggcctcatggaaacagacctggagctcacc
ttctccctgcagtatcctcacttcctgaagcgagatgcaaaccgcctgcacgtgatgctg
cagaggaggaagaggtacaagaaccgaaccatcctgggctacaaaaccctggcggtggga
gtcatcaacatggccgaggtgatgcagcatccgaccgatggagcccacgtcctcggtctc
catagcaacctgaaggatgcttcggtgcgcgcggcggagctgagtgtcctttctctctcc
agccagccaatcgaacaggaggacacaagcggtcaccatggcaacaagaccaaggcctcg
gatcgctcccctgacatggagaactactgggaggacgacgacgacagcttctcctccgaa
caggaaggaagtgatgacgcagtccagcctcaggatatgtacgatgacgatgacgatgtt
cagggaaagacgaagaagtctcacaggaaaatgatccgaaccacctccctgactcagcaa
ccgaacttcaaacagaagtttgtggctctgttgaagagattcaaagtgactgatgaggtt
ctggactcggacccggtgggtcagagtcaggaggttgaggaggacctggacctcctgtac
gacagtctggaggtctacaacccgagcgacagcggccctgagctggacgacaacgacagc
atcctgagcacgcccaaacccaaactcaggccgttcttcgaggggatttctcagtcgagc
tctcagactgatatcgggagtctccacagtcagaggagccaacatagagaacgacctgca
gccgtgagtttctggactctctctctctcactcacacacacacacagacacaggtttttc
ttctgctgctgcatcctcttcttattctctccacaggaagttgaggatgatgttgccatg
ggaacagatgcaggtccagctgctaaactctgtaaaactgagtcgcaaacacacatgtca
ccaagtaagacaggaagtcaggtgtctcgccatccgtggagcgtctccatgaaggacaga
cagaactccagagggacagacagaaccagcagtgtggacagtgagacatcagcggactac
aggatccctcctccacaggttgccagaaagtcagtcctggatcagctgaaccacatcctg
ttctctgacgatcagattcctgacaccatcaccctgatcaacaccacagactggcaggga
cagtatctgtcggaggttcttttcgatcagccaattgtctgcaccgtctcagcggctgac
gttcaggccgccttcagcgccatcatcagccgcatccagagattctgtaactgtaactct
cagacgccgcccacggtgaaggtggcggtgggtggagatcagagctacctcagcaccgtc
ctctgctgctttgtggagcagctcgccagcaagacgcccgattggctgaactacgtccgc
ttcctcgtcctccccgtcggagcccacccgctggccaagtacctggcctccctggatgct
aaattcaacagcctgttcatggacgctggctggagggagctgttcggacgcctggagcct
ccacctcttgatcctgtgggcgtagcgggtcgagtgtctcagtatctgagcggagctgct
gtgtctcacctgtgtccgatctctgaggccatgctcacctgcaaacacaagagccccgac
gacgactcctgtcagaagtttgttccttttatcgggctggtgaaggtcggcgtcgtggag
cagaacttcctgtccacctcagtggacagtgatgacatcatactgggatctcctccctcc
caatcaggagctccgatcagcatcacctccactcctcctccctccccctccatcagctgt
ccgggggaggtgatgggtctgcaggtggactactggagcaatcaggggggaggaggaggc
ggaggagggggaggaggagcaggagagaggaggaaggaggtgggaatgaagaacacgctg
aagagcaacttccgcagtctgcaggtgtcgaggatcagcggaggagaactgatgagcatg
acggtggtgaccaaagagaagaacaagaaagtcatgttcctcagtaaaaagacaaaggag
aaggaggcggagtcgaggagtcagctgatcgagggaatcagcaggttgatctgtacctcc
aaacaccaacacacactgagagtgtctgtagacggagtggagtggaacgatgtcaagttt
ttccagctggctgctcagtggccgacacacgtcaaacactttcctgttgggatcttcagc
tacaacaaaccctga
DBGET
integrated database retrieval system
