Lates calcarifer (barramundi perch): 108882291
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Entry
108882291 CDS
T04895
Symbol
rnf165b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcf04121
]
108882291 (rnf165b)
Enzymes [BR:
lcf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108882291 (rnf165b)
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108882291 (rnf165b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
U-box_ZFPL1
zf-RING_Vps41
zf-ANAPC11
zf-RING_16
Prok-RING_4
RINGv
zf-Nse
zf-RING_4
zf-RING-like
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
108882291
NCBI-ProteinID:
XP_018530249
UniProt:
A0AAJ7PL16
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All DBs
Position
LG13:5630242..5644347
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AA seq
358 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGSHFNRQQQQQQQQHSHATSCRHFQLGPQAPLPMDFPMPH
PGQPQSGINPHLAPPGHQHGPPLHPPLNPLPTPQFQDIPAPPFLPQALHQQYLLQQQILE
AQHRHILPPSSRRTPERVPHQPHRLRPGYEFAPPLHVPPQPVVQQPRYLAEGTDWDLSVD
AGLPPHQYHIHPLPQHYQHYLTSPRMHHFPRNNASTQVVVHEIRNYPYPQLHLLALQSLN
PSRHASAVRESYEELLQLEDRLGSVNRGAVQTTIERFTFPHKYKKRIPQDLKMGLDDEEL
DTDEKCTICLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIETQLTPDS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtgcatgtcggatatctggttcttcccgtattcggctcagtaagaaacaga
ggatcccatttcaaccggcaacagcaacagcagcagcagcagcacagccatgctacctct
tgccggcacttccagttaggtcctcaggccccactgcccatggacttccccatgccccac
ccagggcagccacagtcaggcattaacccccacctggcccctcccggccaccagcatggc
cctccgctccacccgcccctcaatcccctgcccaccccccagttccaggacatccctgcc
cctcccttcctacctcaggcattacaccagcaatacctcctccagcagcagatcctcgag
gcccagcaccgacacatcctgccaccctccagtagacgcaccccagagagagttcctcac
cagccccacagattgcggcccggctacgagtttgctccccctcttcatgtcccccctcag
cctgtggtgcagcagccccgctacctggctgagggcacagactgggatctaagtgtagat
gctggactgcccccccaccagtatcacatccatccgctgccgcagcactatcagcactac
ttgacctctcctaggatgcaccacttcccaagaaacaatgcttcaacacaagtggttgtc
catgagatcagaaactacccatatccccagctgcacttgctggctctgcagagtctcaac
ccctcccgccacgcgtccgctgttagagagagctacgaggagcttctgcagctggaggac
agactgggcagtgtcaaccgtggagcggtccaaaccaccatagagagattcactttcccc
cacaagtacaaaaagagaataccccaggacctgaagatgggtctggatgatgaggagctg
gacacagatgagaagtgcaccatctgtctgtcaatgctagaggatggagaggacgtcagg
agattaccctgcatgcacctcttccaccaggcgtgtgtggaccagtggctggccaccagc
aggaaatgccccatctgcagagtggacattgagacccagctgacccccgacagttga
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