KEGG   Lates calcarifer (barramundi perch): 108882302
Entry
108882302         CDS       T04895                                 
Name
(RefSeq) replication stress response regulator SDE2 isoform X1
  KO
K25059  replication stress response regulator SDE2
Organism
lcf  Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lcf03041]
    108882302
   03032 DNA replication proteins [BR:lcf03032]
    108882302
   03400 DNA repair and recombination proteins [BR:lcf03400]
    108882302
Spliceosome [BR:lcf03041]
 Complex C
  Other components
   Complex C specific factors
    108882302
DNA replication proteins [BR:lcf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    108882302
DNA repair and recombination proteins [BR:lcf03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    108882302
SSDB
Motif
Pfam: SDE2 SDE2_2C Sde2_N_Ubi_vert Tmemb_cc2 EDS1_EP Exonuc_VII_L
Other DBs
NCBI-GeneID: 108882302
NCBI-ProteinID: XP_018530260
UniProt: A0AAJ7LTL0
LinkDB
Position
LG5:227235..231268
AA seq 387 aa
MEVFVNAPRFRCNLVFPDGSVVGDVLTRFIQTQGVSSEDFYVVRNGHRSDLEDPLQHGAI
YHLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKEMAEWLKKQAE
REAEKEQRRLERLQRKLSEPKHQFTDPEYQQQCHDLSERLEDSVLKGLQASSSGLVKVDD
VSAAKRPNSDPSEEPEKKKKKMTKTPAACFWTGVGELDELMSSEDDDESPSTSSSSCGAV
TVTTRREEVEPMQSSSSSSDNQESPETSTDQTLRPSEDQKPPESSTDQTLRPSEDQKPPE
SSRASVESSCQAQQQQRRSAVDLSSVSSADQLESLGLDVLKVELMSRGLKCGGTLLERAA
RLFSVRGLRPDQIDPALLAKPGKAKRK
NT seq 1164 nt   +upstreamnt  +downstreamnt
atggaggtgtttgttaacgctccgaggttcaggtgtaacctggtgtttccggacggttct
gtggtcggagacgttctgacccggttcatccagacacagggagtttcctctgaggatttc
tacgtggtcagaaacggtcatcggtcggatctagaggatcctctgcagcatggagccatc
tatcacctggagccccgcctctgtggagggaagggagggttcggctcgatgctccgagct
ctcggcgctcagatcgagaagacgacgaaccgcgaagcctgcagagatctgagcggacgg
cgtctccgagatgtaaaccatgagaaagagatggcggagtggctgaagaagcaggcggag
cgtgaggcggagaaggagcagcgtcgtctggagcgtctgcagaggaaactgtctgaaccc
aaacaccagttcactgacccagagtaccagcagcagtgccatgacctgtcggagagactc
gaggattcggtgctcaaaggtctgcaggcgtcgtccagcggtctggtgaaggtcgacgac
gtctcggcagcaaagagaccaaactcagatcccagcgaagagccggagaagaagaagaag
aagatgacaaagacgccagcagcttgtttctggacgggggtgggggagctggacgagctg
atgagctcagaggatgacgacgagtctccgtccacttcctcctctagctgtggagctgtc
actgtgacaacgcggagagaggaggtggagcctatgcagagcagcagctcatcctcagac
aaccaggaatctcctgagacctccacagaccagaccctcagaccctcagaggaccagaag
cctcctgagtcctccacagaccagaccctcagaccctcagaggaccagaaacctcctgag
tcctccagagcatcagtggagtccagctgtcaggctcagcagcagcagcgtcgctctgca
gtggatctgtcctcggtgtcgtcggctgatcagctggagtctctgggtctggatgtccta
aaggtggaactgatgtctcgggggttgaaatgtggggggacgctgttggagcgcgccgct
cgactcttctcagtcagaggactgagaccggatcagattgacccggctctgctcgccaaa
ccaggcaaggccaagaggaagtga

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