Lates calcarifer (barramundi perch): 108882347
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Entry
108882347 CDS
T04895
Name
(RefSeq) AT-rich interactive domain-containing protein 4A isoform X1
KO
K19194
AT-rich interactive domain-containing protein 4A
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108882347
03036 Chromosome and associated proteins [BR:
lcf03036
]
108882347
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
ARID
108882347
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
108882347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBB1NT
ARID
Tudor-knot
MSL3_chromo-like
Tudor_2
Motif
Other DBs
NCBI-GeneID:
108882347
NCBI-ProteinID:
XP_018530314
UniProt:
A0AAJ7LTX3
LinkDB
All DBs
Position
Unknown
AA seq
1407 aa
AA seq
DB search
MKAADEPAYLTVGTDVSAKYRGAFCEAKIKTVKRMVKVKVTLKGESTSQVVQDDQVKGPL
RVGSTVEVKTNEGLSSEAVISKLTDASLYTVVFDDGDEKTLRRTSLCLKGERHFAESETL
DQLPLTNPEHFGTPVIGKKSNRGGRRSSQAVADEENESSSSEDEEEDRRRLNDELLGTVC
SIENEEEPSSWYLALVVSPSCNDELVVKKDQCLVRSFCDSKFHTVARRHVHPVTSISIAK
SDYSNRRGLEAAQGFMRSREVPDVWKMDMSQILDSSSSDEDDEEEKESEEEEEDEDEKKK
KKHIKEEPEEEPDPEERDHFLQQLYKFMEDRGTPINKPPVLGYKDLNLFKLFRLVYHLGG
CHKIESGTVWKQVYMDLGIPVLNSAASYNVKTAYRKYLYGFEEYCRSASITFRTIHHNDP
RPPTATPTNQKTATGAELKEPSTPPVKAEPVDDKREEAESESESEKEEVKERQSSPRGRR
RCVKPDRDSSSRPEKRGGGENSDEQREVRRRSNRRMDDSEKGSEEEEEDDDDEEEEEAER
RRGDRSEDEEDGDSVTGTKVRVKYGRGKTQKIYEAHIKKTDIDNGEQFYLVHYYGWNVRY
DEWVKADRIIWPVEKGTKKRQRKKVKQNKDEGEKDEEKPAVAKPTGAKRGRPQIRTTPTG
SAGRSVSKTPSNEGRSNGRSSRTETTPNMANGDNTPRRRTRRTSGMYDSDRASIEDSGNS
SDDSESEDPPDKKPSPWRGRTEAPPCQEEEEEEEEEEQEEVREEETREVANITTPASNNG
TVATATASQLPAATAAPPCPSMPQEKVDKVLSQSEKEEAEQREEPAEATVLPGHLDKENK
TSLVQKTTSPGQEVVTKTSPSTTSPSPDKINKASPAAAADKHKTSPEKQQQVSSPLPATE
EEDRCTPLSSPRVKGRRANFRETGSETPPRIPLCTPSPTPTSAASPSHSAALSSPPRGVT
KRQEEPMVVLRCLPSEHLPLDSPAADSDTDSATEEEEEAGSADERSSVALKRKAAEQRAA
DKKLRPDRRQEEAASPKTPAAAGASPRTLPSPLRPERRSEGPMKTEERPRPAEETQREVS
EERLSGGATKEPEVHAGIPPFAPEAPGSSPAEELEPQIGPEALVCHEVDLDDPDEKEKPV
SSEHLLLMMREQQQAPPPLPHLLHTPHLPQPQVRPFLPAAAPSSAPCPEELRPARSAAED
ERGAARGEQEGDSSPGFDGSASSSSTSLLSLQENKDRGQKRVMDGHPSPSAKKQKRNQKR
PNTPGKVEKNGAGHSSDSEDQSRLSSLSKSQKSRCPGLSSPSSHSKDKQSFPSPQRTYKW
TFQLDELDSMSSTERISFLQEKLQEIRKYYMTLKSEVASIDRRRKRLKKKEREVSNTTAS
TSSGSSDTGMSPSSASPTQNTVAVECR
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagcagacgagcctgcctacctgacagtggggacagatgtcagcgccaagtac
agaggagccttctgcgaggccaagatcaagactgtgaaacgcatggtgaaggtcaaggtg
accctgaaaggtgagagtacgtcccaggtggtgcaggacgaccaggttaaaggacctttg
agggtgggctccactgtggaggtgaagactaacgagggtttatccagcgaggccgtcatc
agtaaactgacagacgccagtctctacactgtggtgtttgatgatggagatgagaagact
ctccgtcgtacgtctctgtgcctgaagggagagagacattttgcagagagcgagacgttg
gaccagctgccattgacaaacccggagcatttcgggactccagtcatcggcaagaagtcg
aaccggggtggacggcgttcgtcccaggctgtggctgacgaggagaacgagtcttcatcc
agtgaggatgaggaggaggacaggaggaggctgaacgacgagctgctggggacagtgtgc
agcatcgagaacgaggaggagcccagcagctggtacctggctctggtggtgtctccgagc
tgcaacgatgagctggtggtgaagaaggatcagtgtctggtcaggtcattctgcgactcc
aagtttcacacggtggcgaggagacacgtccaccccgtcacctccatcagcatcgccaag
tctgactactccaacaggagaggtttggaagcagcccagggcttcatgaggagcagggag
gttccagatgtgtggaagatggacatgagtcagatcctggactcgtcctccagcgatgag
gacgatgaagaggagaaggagagcgaggaggaggaggaggacgaagacgagaagaaaaag
aagaaacacataaaggaggagccggaggaggagccagacccagaggagagagaccacttc
ctgcagcagctctacaagttcatggaggacagagggactcccatcaacaaacctccagtg
ctgggttataaagacctgaacctcttcaaactcttcagactggtctatcacctgggaggc
tgccacaagattgagtctgggaccgtgtggaagcaggtctacatggatctggggatccct
gtcctgaactctgctgcgtcctataacgtcaagaccgcctacaggaagtacctgtacggc
ttcgaggagtactgccgctccgcctccatcaccttcaggaccatccatcacaacgacccc
cgccctcccactgccacaccgaccaatcagaagacagcgacgggggcggaacttaaagag
ccctccacgccaccggtgaaggcggagcctgtcgatgacaagagagaggaggcggagtca
gagagcgagagcgagaaggaggaggtgaaggagagacagtcgtcaccgagggggaggagg
aggtgtgtgaagccagacagagactcgtcctccagaccagagaagagaggaggaggagag
aacagtgacgagcagagggaggtgaggagacgcagcaacagaagaatggacgactcggag
aaaggctctgaggaggaggaggaggatgacgatgatgaagaggaggaggaggcagagagg
aggagaggagacaggagcgaggacgaggaggacggagactctgtgacggggacgaaggtc
agggtgaagtacggcagagggaagacccagaagatctacgaggctcacatcaagaagaca
gacatcgacaacggagaacagttctacctggttcactactacggctggaacgtcaggtac
gatgagtgggtgaaggccgacaggatcatctggcctgtggagaagggaacaaagaagaga
cagaggaagaaggtgaagcagaacaaagatgagggagagaaagacgaagagaagcccgcg
gtggcgaagccgacgggagcgaagcgaggtcgacctcagatcagaaccacgcccaccggc
tcggccggacgcagcgtctccaaaacaccgagcaacgaggggcggtccaacggcaggagc
agcaggacggagacgacgcccaacatggccaatggagacaacactcctcgcaggagaacc
aggagaacgtcggggatgtacgactcagaccgagcgtccatcgaggattctgggaactca
tcagacgacagcgaatcagaggacccgcctgataagaagccatcaccgtggcgagggagg
accgaggcccctccctgccaggaggaggaggaggaggaggaggaggaggagcaggaggag
gtgagggaggaggagacgagagaggtcgccaacatcacgacgcctgctagcaacaatggc
actgttgccacggcaacggcaagtcagctgcctgctgccaccgccgcaccgccgtgtccc
agcatgcctcaggagaaagtagacaaagtgctgagccaatcagagaaggaggaggcggag
cagagggaggagcctgcagaggccactgtgttgccgggtcacctggacaaggagaacaag
acgtcattggttcagaagacgacgtctcctggacaggaagtggtcaccaagacgtctccc
agcacaacgtcaccgtcccctgacaagatcaacaaggcgtctcctgccgccgccgcggac
aaacacaagacgtctccggagaaacagcagcaggtgtcctcccctctacctgctacagag
gaggaggacaggtgcactcctctgtcctcccccagggtcaaaggtcgcagggccaacttc
agggagacaggctctgaaactcctcccagaatccccctctgtactcccagccccaccccc
acctctgccgccagcccctcccactccgcggcgctgtcgtctcctccccgcggcgtcaca
aagagacaggaggagcccatggtggtcctccgctgcctcccgtccgagcacctccccctc
gactctcccgcggcggactctgacaccgactctgccaccgaggaggaggaggaggcgggg
tcagcggacgagaggagcagcgtggcgctcaagcgtaaagcggcagagcagagagcagca
gacaagaagctccgccccgacaggaggcaggaggaggccgcctcccccaaaactcccgca
gcggccggagcctcacccagaaccctcccctctccgctccgcccggagaggaggagcgag
gggccgatgaagacggaggagcggccccgtccggctgaggagacccagagggaggtgtcg
gaggagcgtctgtcaggcggagccaccaaggagccggaggtgcacgccgggattcctccc
ttcgctccggaggcgccgggctcctcccccgccgaggagctggagccgcagatcggcccc
gaggcgctggtctgccacgaggtggacctcgatgaccccgacgagaaggagaagcccgtc
tcctcagagcacctcctcctcatgatgagggagcagcaacaagctccgcccccgctgcct
cacctcctccacacccctcacctcccccagcctcaggtcaggcccttcctcccggccgcc
gctcccagctccgccccctgccccgaggagctccgcccggccaggagcgccgccgaggac
gagaggggagcagcgaggggggagcaggagggagactccagtcctgggtttgacggcagc
gcctcctcctcctccacctccctgctgtctctgcaggagaacaaggacagaggtcagaag
agggtgatggacggtcaccccagcccgtcggccaagaaacagaaacgcaaccagaaacga
ccaaacacacctgggaaggtggagaagaacggagcaggtcacagcagtgacagtgaggac
cagtctcgtctgtcgtctctgtccaagtctcagaagtctcgttgtcctggtttgtcgtct
ccgtcttctcacagtaaagacaaacagagcttcccctcccctcagcgcacgtacaagtgg
accttccagctcgatgagttggacagcatgtcgagcacagagaggatctccttcctgcag
gagaagctgcaggagatcaggaagtactacatgaccctgaagtcagaggttgcgtccatc
gacagacgcaggaagaggctaaaaaagaaggagagagaagtgtcgaacacgacggcgtcg
acctcctctggctcctcagacacaggtatgagtccatcctcggcctcgcccactcagaac
accgtcgctgtggagtgcaggtga
DBGET
integrated database retrieval system
