Lates calcarifer (barramundi perch): 108882348
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Entry
108882348 CDS
T04895
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108882348
04121 Ubiquitin system [BR:
lcf04121
]
108882348
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
108882348
Ubiquitin system [BR:
lcf04121
]
Ubiquitin ligases (E3)
Atypical E3
108882348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
108882348
NCBI-ProteinID:
XP_018530316
UniProt:
A0AAJ7LTI6
LinkDB
All DBs
Position
Unknown
AA seq
675 aa
AA seq
DB search
MSSPQVSSSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHLKRA
HGFQEGRSPAGGPPPPPQQQPAVAKSQAVLLTGKEPVTQLNHHHHQADGAGKSQQPGLDR
YSLGADGRARFDYSGHSSSSRLPNGLGGPNGFKPDDGPPELNRQSPNSRSRSHGGLVSAP
GQMNVPPNLLPQTLLNGPHGMTTRAAPQGSMVPLPGQVGLSDPGGKRPASVSSTDQDREL
KEKQRNAEALSELSESLRNRQEEWASKPKMVRDTLVTLSGCTPFDVRFKKDHGLVGRVFA
FDAVSKPGMDYELKIFIEYPSGSGNVFSSASGVAKQMYQDCMKDFGRGLSSGFKYLEYEK
KHGSGDWRLLGDLLPESLRFFKEGLGGDMLPQPYIDGSYPLLPTSLVLPGRALASGSGNG
SSRAGVRKRKASPEPDSAEGGLKLTEEQQRQQWINSQTEALKLSMAAGSFAGPPPPLGSG
HPGLPSGRASPPESAAPPQNGQSPMAALMSVADTLGNAHSPNKDRDSVHSTTSSSRHNSS
SPVSPASVSGQRRLSSRNGDLGLSAPSQSAGGMDQVHAQNVPDSPMANSGPLCCTICHER
LEDTHFVQCPSVPNHKFCFPCSRESIKAQGASGEVYCPSGEKCPLVGSNVPWAFMQGEIA
TILAGDVKVKKERDP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccgcaggtctcctcgtcccgcagacagtcatgttatctgtgcgacctgccc
cgcatgccctgggccatgatctgggacttcaccgagcccgtgtgccgcggctgcgtcaac
tacgagggcgcggaccggatcgagtttgtcatcgagaccgcccggcacctgaagcgggcg
cacggcttccaggagggtcggtcccccgccggcggaccgcctcctccgccgcagcagcag
cccgccgtggcgaagagccaggcggtgttactgaccgggaaggagccggtgacgcagctc
aaccaccaccaccaccaggcggacggagcggggaagtcccagcagcccggtctggaccgg
tactcgctgggtgccgacgggcgggctcgattcgactacagcggacacagcagcagcagc
aggctgccgaacgggctcggaggaccgaacgggtttaaaccggacgacggaccccccgag
ctgaaccgacagagcccgaactcgaggagcaggagccacggggggctggtgtcggcgccg
gggcagatgaacgtgccgccgaacctgctgcctcagactctgctgaacggaccgcacggc
atgacgaccagagccgccccgcagggctccatggtccccctgcccggacaggtggggctg
tccgacccgggagggaagagacccgcctcggtgtccagcacggaccaggaccgagagctg
aaggagaagcagcggaacgcggaggctctgtccgagctgagcgagagcctccggaaccgg
caggaggagtgggccagcaagccgaagatggtgcgggacacactggtgactctgtccggc
tgcaccccgttcgacgtccgcttcaagaaagaccacgggctggtcgggagggtgttcgcc
ttcgacgccgtgtccaaacccgggatggactacgagctgaagatcttcatcgagtacccg
agcggttccgggaacgtgttctccagcgcgtcgggggtggccaagcagatgtaccaggac
tgtatgaaggacttcggccgcggtttgtcctccgggttcaaatacctggagtacgagaag
aagcacggctccggggactggcgcctgctcggggatttattaccggagtccctgcggttc
tttaaggaggggctggggggggacatgctgccgcagccctacatcgacggcagctacccg
ctcctgcccacctctctggttctccccggccgagctctggcctcgggcagcgggaacggc
agctccagggccggggtgcggaagaggaaagcctccccggagccggactctgcggagggc
gggctgaagctgacggaggagcagcagaggcagcagtggatcaacagccagaccgaggcg
ctgaagctctccatggccgcgggctccttcgccgggcctcctcccccgctgggctcggga
caccccggcctcccctccggccgcgcctcgcccccggagtccgccgcgcctccgcagaac
ggacagtccccgatggccgcgctcatgtcggtcgcggacacgcttgggaacgcgcactcc
cccaacaaggacagagactcggttcactccaccacctcctcctccagacacaacagcagc
agcccggtgtcccccgcctccgtgtccggacagaggcgcctctcgtcccgcaacggagac
ctcgggctgtccgcgccgtctcagtccgcgggcggcatggaccaggtgcatgcgcaaaac
gtgcccgactcccccatggccaacagcggccccctgtgctgcacgatctgccacgaacgg
ttagaggacacgcatttcgtgcagtgtccgtccgtccccaaccacaagttctgcttcccc
tgctccagagagagcatcaaggcgcagggagcctccggggaggtgtactgccccagcggg
gagaagtgccccctggtcggctccaacgtgccctgggccttcatgcagggggagatagcg
accatcctggccggagacgtgaaggtaaagaaggagagagacccctga
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