Lates calcarifer (barramundi perch): 108882359
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Entry
108882359 CDS
T04895
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
108882359
Domain-containing proteins not elsewhere classified [BR:
lcf04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
108882359
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GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_5
LRR_4
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
DHU1_N
Rop
Motif
Other DBs
NCBI-GeneID:
108882359
NCBI-ProteinID:
XP_018530332
UniProt:
A0A4W6DPI5
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Position
LG19:6192465..6305786
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AA seq
878 aa
AA seq
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MERLLLCVMLAVAMAVRAQICPKRCVCQILSPNLATLCAKKGLLFVPPNIDRHTVELRLA
DNFVTSVKRKDFANMTRLVDLTLSRNTISYITPHAFADLENLRALHLNSNRLTRIGNDTF
SGMSKLHHLILNNNQLVMIHQGAFNDLLALEELDLSYNNLDSIPWEAIQKMTSLHTLSLD
HNMLDFIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGVLTPSSFALSFGG
NPLHCNCELLWLRRLNREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRYSHEMRVL
EGQRVALRCKARGDPEPAIHWISPEGKLVSNSSRTLVYTNGTLDILISTVKDTGSFTCIS
SNPAGEAHQTVDLVIIKLPHISNNTNNIQEPDPGSSDISTSTRGGANGSNVTGDVKGGVD
KRVVTAEATSSTALIKFNFQRNIPGIRMFQIQYNGSQDDSLVYRMIPPSSKNFLVNNLAA
GTQYDLCVLAIYDDVITSLTATRVVGCVQFTTESEYMRCHFMQSQFLGGTMIIIIGGIIV
ASVLVFIIILMIRYKVCNPGEGGKGVSMSMTNVHSQTNGQQSQGCTVTPSASKHGSIGLD
DLSGGTKKRSGAAGGGGGGKDTLTQSSDSSLPDCSTATSVLSQPWGARSPTGGIEEREKV
GEERAQAGVSMPTAASATGTLPKPKRKPAPSKPGSVCSNTSAVPENLPSSSPRPPSSSSS
STATSALLPPSTPLENLNTNRNNSTSLNQTPPPFAPSPFSSPLTTPSPVPSIRFRETPIL
RRAPRPGSSSSAASSSAKYQTLPTEEGGRSRARRRYSLSEGGSKTLSSHQGGGGAPKLGR
IVRNKRSQSMSGMLLPKDGDGDSDKGRCDSDWILESTV
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggagaggcttttgctgtgtgtgatgctggcagttgccatggcagtgagggcacagatc
tgcccgaagcgctgcgtatgtcagatcctgtcgcccaacctggcaaccctctgtgccaag
aaaggtctactgtttgtaccaccaaacattgataggcatacagtggagctacggctggct
gacaactttgtcacaagtgtgaagaggaaagattttgcaaacatgacacggcttgtagac
ctaacattatctagaaacaccatctcctacatcacacctcatgcctttgctgatctggaa
aacctcagagccctacacctcaacagtaaccggctgacgaggataggcaacgacacattc
agcgggatgtccaagctccaccacctgattctgaacaacaaccagctggtgatgatccac
cagggagcgttcaatgacttgctggcgctggaagaattggacctcagttacaataacctg
gactctattccatgggaggccattcagaaaatgaccagcctccatacgttgagtttagac
cacaacatgctggacttcattccagagggaaccttctcgctgctgcagaaactcaaccgg
ctggacgtcacctccaataaactccaaaagctaccaccggaccctctttttcaacgagca
caggtcctggccacgtcaggggtcctgaccccttcttccttcgcgctgtcattcggtggg
aaccctctccactgtaactgtgagttactgtggctgagacggttgaacagggaggacgac
ctggagacatgcgcttcaccccagcacctctccggtcgatacttctggtccatccctgag
gaagagttcttgtgtgagccccccctcatcaccagatactcccatgagatgagggtgctt
gaagggcagcgggttgcgctaaggtgtaaggcaagaggtgacccagagccagccatccac
tggatctccccggagggcaaattggtatctaactcctccagaacgttggtctacaccaac
gggaccctggacatcctcatcagtactgtgaaagacactggctccttcacttgtatctcc
tccaaccccgctggtgaagcccaccaaacagtagacctggttattattaaactccctcac
atctccaacaacaccaacaacatccaggaacctgacccgggatcatcagacatttccacg
tcgacccgaggcggagccaacggaagcaatgtgactggtgatgtgaagggcggggtggac
aagagggtggtcaccgctgaggctacgtcatcgacagccctgatcaagttcaactttcag
aggaatattccaggcattaggatgttccagatacagtacaacgggagccaggacgactca
ctagtgtacagaatgatccccccatcaagcaagaacttcctggtcaacaacctggcagca
gggacccagtatgacctctgcgtgttggccatctacgatgatgtcatcacctccctgaca
gcgacacgcgtggtcggctgtgtgcagttcaccaccgagtcggagtacatgaggtgtcat
tttatgcagtcgcagttcctcggcgggactatgatcatcatcattggagggataatagtg
gcctcggtgctcgttttcatcatcatcctgatgatacggtacaaggtgtgcaaccctgga
gagggtggtaaaggtgtctcaatgtcgatgaccaacgttcactcacagaccaatgggcag
cagtcacagggatgcactgtgactcccagcgcctctaaacatggctcaatcggattagac
gacctctcaggaggcacaaagaaaaggagcggagcagcaggaggaggaggtggaggcaag
gatactctgactcagtcgtccgactcttccctgcctgactgctccacggctacgtcagtc
ctcagccagccttggggtgccaggagcccgacaggtggcatcgaggagcgggagaaagtg
ggtgaagagagagctcaagctggcgtctccatgcccaccgctgcctccgccaccggcacg
ctacccaagccaaagcggaaacccgctccgagcaagccaggctcggtctgctccaacacc
tcggccgtccccgaaaacctcccctcctcctcccctcgcccgccatcctcctcctcctcc
tccactgccacttctgccctcctccctccctccacccccctagagaacctcaacaccaac
cgcaacaactccacctccctcaaccagaccccgcctcccttcgccccttcccctttctcc
agccccctcaccacgccgagccccgtcccatccatccgattcagagagacgcccatcctg
cgtcgggctccccgccctggctcctcctcctccgctgcttcctcctccgccaagtaccag
actctccccacagaagagggagggaggagcagggcgaggaggaggtactccctcagcgaa
ggaggctcaaagactctgtcatcccatcagggaggaggaggagcacccaaactggggcgc
atagtgcggaataaaaggagccaatcaatgagtgggatgctgctccctaaagatggagat
ggagactcggacaaagggcggtgtgactcggactggatcttagagagcacggtttga
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