Lates calcarifer (barramundi perch): 108882536
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Entry
108882536 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein OTX1 B-like
KO
K09326
homeobox protein OTX1
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcf03000
]
108882536
Transcription factors [BR:
lcf03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
108882536
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
SatD
Motif
Other DBs
NCBI-GeneID:
108882536
NCBI-ProteinID:
XP_018530591
LinkDB
All DBs
Position
LG5:complement(1595232..1600311)
Genome browser
AA seq
355 aa
AA seq
DB search
MMSYLKQAPYGMNGLGLSGAAMDLLHPSVGYPANPRKQRRERTTFTRTQLDILESLFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSSSSSSKVKPLKKKSSPTREST
GSESSGQFTPPAVSSSSSTTSSSSSSSSSVSSVSSGLGGPGLLSSSTSVTAPVSSIWSPA
PISPAPAPXAALPDPAAAAPASASCMQRSVSSSSSSTASYPVSYSQTAAAAAAYGQGYPA
SASGSYFGGVDCGSYLAPMHSHHHPHHPHQLSPMTGGSMSGHPHHHIGQTSGHHHHHHHP
PHHHHQAYSAPGLAFNSTDCLDYKEQTAASAWKLNFNASDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttatctcaaacaggccccgtacgggatgaacggactgggcctgagcggagcc
gccatggacctgctgcacccgtctgtgggctaccccgccaacccgcggaagcagcgccgg
gagcggaccaccttcacccggacgcagctggacatcctggagtcgctgttcgccaagacg
cgctacccggacatcttcatgagggaggaggtggcgctgaagatcaacctgccggagtcc
agagtgcaggtgtggtttaagaacagacgagctaaatgtcggcagcagcagcagagcagc
agcagcagctccaaggtgaagcccctgaagaagaagtcgtctccgaccagagagagcacc
ggctcggagagcagcggtcagttcacgccgccggcggtgtccagctcctcctccaccacc
tcctcctcttcctcctcctcctcctccgtctcctctgtctcctccggtctcggtggtcct
ggtctcctcagctcctctacctccgtcaccgcccccgtgtcgtccatctggagcccggcg
cccatctccccggccccggctccannggcggcgctgccggaccccgctgccgccgccccc
gccagcgcctcctgcatgcagcgctccgtgtcctcctcctcctcctccaccgcctcctat
ccggtgtcgtacagccagacggcggcagcggcggcggcgtacggtcagggctacccggcc
tccgcctcaggctcctacttcggcggcgtggactgtggctcgtacctggcgcccatgcac
tcccaccaccacccgcaccacccgcaccagctcagccccatgaccggcggctccatgtcg
gggcacccgcaccaccacatcggccagacgtctgggcaccaccaccaccaccaccacccg
ccgcaccaccaccaccaggcgtacagcgcgcccggcctcgccttcaactccacagactgt
ctggattacaaagagcagacggcggcttcggcctggaagctcaacttcaacgcctccgac
tgtttggactacaaagaccaggcgtcgtggcgtttccaggtgctgtga
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