Lates calcarifer (barramundi perch): 108882616
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Entry
108882616 CDS
T04895
Symbol
brpf3b
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108882616 (brpf3b)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
108882616 (brpf3b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
Bromodomain
zf-HC5HC2H
PWWP
PHD_2
PHD
PHD_NSD
FYVE_2
C1_1
Motif
Other DBs
NCBI-GeneID:
108882616
NCBI-ProteinID:
XP_018530725
UniProt:
A0A4W6BSX5
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Position
LG6:6494601..6505631
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AA seq
1255 aa
AA seq
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MRKPRRKGQVAGGGGGDVKKSNGTVGGRGGARQRSPSPYSLKASPSRETLTYAQAQKVVE
VELDGRLHRISVLEPLEVITEDEMMAQDISECNSNKENSEQSSPPTSSAQTVRKAVTPRG
RRKDSKCPPVKSPPPSKNHCPSSHPQTPEKLHTTHHHHMTLPEPKFRVLETFTPVEAPPL
PTAYYRYIERSAEEQEAEAEYDMDEEDTAWLEMVNAGRTSEGYSAVSPDTFELLVDRLEE
EAYWEARSRAPSQSTVDDDAFCCVCLDDECLNSNVILFCDSCNLAVHQECYGVPYIPEGQ
WLCRCCLQSPQKPVDCVLCPNRGGAFKQTSDGRWAHVVCAIWIPEVCFANTVFLEPVEGV
NNIPPARWKLTCYLCKQKGRGASIQCHKANCYTAFHVTCAQRAGLFMKIDPVRETNVNGT
TFSVKKTAYCEAHSPPGQETVSDEESEGRVVGSRGRASRGRSAYTEGPRTPKKGRKSDDD
GKTDKKKGKKSTESTAQQTASPQVTVPQIPTSRLNIICKGIIFQRKNQFMQRLHSYWLLK
RQSRNGVPLVRRLHSNIQTQRNTEQPEVDEKVSAAREALRYWQKLRHDLEKARLLVELIR
KREKLKREQVKVHQAALEMQLAPMLVLLRSTLEQLQEKDTAQIFAQPVNIKEVPDYQEFI
SQPMDFSTMRSKLESHAYRSVADLEADFNLMVSNCLLYNAKDTVFHRAALRLRDLGGAIL
RHAQRQATNTGLDLDTGMHLPESPQKRDFYSCTWEDVDSVLDPDNRLHMTVEEQLKELLE
KLDFVTSMRCSGARTRRIRLLRREINNIRYRQGQHPRHSLLNGHLKDDDEDDDDDEDDEK
DIKADNGLSSSDKEDLKSTSPPTLEPTGPAPPPRQGDAPLEPPTLRPITGEPQPLSWPCK
RLKMDSDLSDGATENINCTKTQERPASPPPSLHSEGQVVVNGMPELSSPPRPTSGGVGRR
TSVLFKKAKNGAKLFRDRDNALPNGKGLQDENTSNTPTATNSTASTPSSTPLSTPSKTPQ
KSPGPPALNEQWTPSRDMCSDGELERTPNHTLESGLTNGFNKHKDGGSDSEYSPCPVLRK
EISSPPKRSLGKPALSKVPFLEIVNGDSDYTGNGSQTSEDETELEPLDLVWAKCRGYPSY
PALIIDPEMPEEGLLHNGVPIPVPPKEVLHLGEQRQEETNERLYLVLFFDNKRTWQWLPR
EKVTPLGVDDTADKLRIMEGRKSSIRKSVQVAYDRAMIHQSRVSHSHGFVASNYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagccacgtcgaaaaggccaggtggccggaggaggtggaggagatgtcaagaag
tccaatgggacagttggcgggcgtgggggtgcccgtcagcgatctccatccccttacagc
ctcaaagcctctccaagcagagaaaccctgacctatgcgcaggcccagaaggtggtggag
gtggaactggatggtaggcttcaccgtatttctgttctggagcccctggaggtcattact
gaagatgagatgatggctcaggacattagtgagtgtaacagcaacaaggagaacagtgaa
cagtcatcacctcccaccagcagtgcccagacagtccgcaaagcagtcacaccccgaggc
cgcaggaaagactccaaatgcccccctgttaagtcgccaccaccttccaagaaccactgt
cccagttctcatccacaaactcctgagaagttacatacaacacaccatcaccacatgacc
ctccctgagcccaagtttcgtgtcctagaaaccttcacgccagttgaggcacctcctctg
cctacggcatattaccgttacattgaacgctcagccgaggagcaggaagctgaggcagaa
tatgacatggacgaagaggacaccgcctggttggagatggtcaacgctggccggacgtca
gagggttactcagctgtctcaccagacacctttgagctgctggtggaccggctggaggag
gaagcatattgggaagcccgcagtcgggcgccctctcagagcactgtcgacgatgatgcc
ttctgctgcgtgtgcctggatgatgagtgcctcaacagcaacgtcatcctcttttgtgac
tcctgcaacctggctgtgcaccaggagtgttatggagtgccctatatccctgagggccag
tggctgtgccgctgctgcctccagtcccctcagaaacctgtagactgcgttctatgtcca
aatcgtggtggtgctttcaagcaaacaagtgacggccgctgggcacatgtggtctgtgcc
atctggatccctgaagtctgctttgccaacacagtgtttctggaaccagtggaaggggtc
aataacattcccccggcacggtggaaactgacctgctacctgtgcaagcagaagggccgc
ggtgcatctattcagtgtcacaaagccaactgttacaccgcatttcacgtcacgtgtgct
cagcgcgctggcttgtttatgaagattgatcctgtgcgagagacaaacgtcaatgggacc
acgttttccgttaagaagacagcatactgcgaggcccattcaccaccaggtcaagaaact
gtatcagatgaggagagtgaaggaagagtggtgggcagcagagggagggcgagtagagga
cgcagtgcctacacagaaggcccgaggacaccaaaaaaaggcagaaagtctgatgatgat
ggcaaaacagataaaaagaaagggaagaagagtacagagtcaacagctcagcaaactgct
tcaccacaagtgacagtgcctcagatacccacaagcaggctgaatatcatctgcaaagga
atcattttccagaggaaaaaccagtttatgcagaggctgcatagctactggttactgaag
cgtcagtcaaggaacggtgtgccgctggtccggcgtttgcactctaacatccagacccaa
aggaatactgaacagcctgaggtggatgagaaggtttctgcagcaagagaggcactgaga
tattggcagaagcttcgacatgaccttgaaaaagccaggctgctggtggagctcatccgc
aagagggagaaactcaaacgagaacaggtcaaagttcaccaggcagctctggagatgcag
ttggcccctatgctggtgctgctccgctccaccctggaacaactacaggagaaggacaca
gcccagatctttgcacagccagtcaacatcaaggaggtcccagattatcaggagttcatc
agccaacccatggacttttccaccatgcgctctaagctggagagtcatgcctaccgctcg
gtggctgacctggaagctgacttcaatctaatggtgtccaactgcctcctctacaatgcc
aaggacacagtcttccaccgagcagcactgcgtcttcgagacttagggggggctatattg
cgccatgcacaacgacaagccactaacaccggcctcgacctggacactggcatgcacctc
ccagagtcaccacaaaagagagacttttatagctgcacctgggaggatgttgacagtgtg
ctagatccagacaaccggcttcatatgaccgtggaggaacagttgaaggagctgttagaa
aagctggactttgtcacctccatgcgatgcagtggtgcccgaacccgacgtatccgcctg
cttcgtcgtgagatcaacaacatccgctacaggcagggccaacacccccgccacagcctc
ctcaacggacacctgaaggatgatgatgaggatgacgatgatgacgaagacgacgagaaa
gacatcaaggcagataacggcctttcatcttcagacaaagaagacctcaaatccacttca
ccaccaacactggaacctacagggccagctcctcctccacgacagggggatgcgcctctg
gaacctcccactctgcggccgatcacaggggagccacagccactcagctggccatgcaag
cgcttaaagatggacagtgacctctcagacggtgccacagaaaacattaattgcactaaa
acacaggagcggccagcgtcgccgcctcccagtttgcacagtgaagggcaggtggtggtc
aatggtatgccagagctcagcagtcccccacggcctaccagtgggggggttggacgacga
acctctgtgttatttaagaaggcaaaaaatggagcaaagctgttcagagacagagacaat
gctttaccaaatggaaaggggctgcaggatgagaatacaagcaacacccctacagcaacc
aactccacagccagcaccccatcttccacacctttgtcaactccatccaagaccccacag
aaaagcccaggaccccccgccctcaacgaacagtggacccccagccgagacatgtgctca
gatggtgagctagagaggacaccaaatcatacactggaaagtggactgaccaacggcttc
aataagcacaaagacggtgggtccgactctgagtacagcccttgcccagtcctccgcaaa
gagatcagctcaccacccaaacgaagcctcgggaaaccagctctttccaaagttcccttc
ctggagatagtcaatggagactcagattacactgggaatggcagccaaacatctgaggat
gagacagagctggagcctctagatctggtttgggccaagtgtcgaggatatccctcatat
cctgctctgatcattgacccagagatgccagaggagggcctgctgcacaatggggtaccc
atccctgtcccacccaaagaagttctccatctgggggagcagagacaggaggagaccaac
gagaggctttacctggtgcttttctttgacaacaagagaacatggcagtggctcccacgt
gaaaaggtgacacccctgggtgtagatgatacagctgacaagctgcgcatcatggagggc
cgcaagtctagcatccgcaagtctgtccaagtggcgtatgacagagccatgatccaccag
agccgagtcagccacagccacggcttcgtggcctctaactacctgtag
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