Lates calcarifer (barramundi perch): 108882617
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Entry
108882617 CDS
T04895
Symbol
htr1aa
Name
(RefSeq) 5-hydroxytryptamine (serotonin) receptor 1A a
KO
K04153
5-hydroxytryptamine receptor 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108882617 (htr1aa)
04082 Neuroactive ligand signaling
108882617 (htr1aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108882617 (htr1aa)
G protein-coupled receptors [BR:
lcf04030
]
Rhodopsin family
Biogenic amine
Serotonin
108882617 (htr1aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7TM_GPCR_Srx
7tm_4
DUF8525
Motif
Other DBs
NCBI-GeneID:
108882617
NCBI-ProteinID:
XP_018530731
UniProt:
A0A4W6CF02
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Position
LG13:6503722..6505930
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AA seq
427 aa
AA seq
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MDFLTTSGNDSNATASGYPHGVDVVADWDGGENGTGSGSLPDVELSYQIITSLLLGSLIL
CSIFGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLVLPMAALYQVLNKWTLGQEI
CDLFISLDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAALLISVTWLVGFSIS
IPPMLGWRSAEDRANPDACIISQDPGYTIYSTFGAFYIPLILMLVLYGRIFKAARFRIRK
TVKKTETAQVSDKCLTVSPAIFHKKTNGEAGGKGWKRSDESKTSSPCVNGAVKHGEEGES
LEIIEVISNSKTHLPLPNTPQSSQGYENMNEKNSGAKRKIALARERKTVKTLGIIMGTFI
FCWLPFFIVALVLPFCAESCYMPDWLGAVINWLGYSNSLLNPIIYAYFNKDFQSAFKKIL
KCKFHRP
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggattttttaaccacaagcggcaacgacagcaacgcgaccgccagcggttaccctcac
ggggtggacgtggtcgccgactgggacgggggcgagaatggcacggggtctgggtctctg
ccagacgtggagctgagttaccagataatcacctctctgctcctggggtccctcatcctc
tgctccatatttggcaatgcgtgcgtcgtggcagccatcgccctggagagatctctccag
aacgtggctaactatctgatcggatctctggccgtgaccgacctcatggtatcggtgctg
gttctgccgatggcggccctctaccaggttttgaacaagtggacactgggacaggagatc
tgtgatttattcatctctctggatgtactgtgctgcacatcatccatcctgcatctgtgc
gcaattgccttggacaggtactgggccataacagacccaattgactatgtaaataaacgg
acaccaaggcgagctgcgctcttgattagcgtgacttggctagttggtttctccatctct
attccgcctatgttaggctggagaagcgccgaagacagggcgaaccccgacgcttgcatc
atcagccaggacccgggctacaccatctactccacgtttggggctttttacatccccctt
atcctcatgttggtcctgtacgggcggatattcaaggctgctcgctttcggattcgaaag
acagttaagaaaaccgagacagcacaagtgtcagacaagtgcttgaccgtgtctccggcc
atcttccacaagaaaaccaacggggaggccgggggcaaaggctggaagcgcagcgacgag
tcgaaaacaagctccccgtgcgtaaacggcgcggtgaagcatggagaagagggtgagtcg
ttagagatcatagaagttatcagcaactcgaagacgcacctgcctctgcccaacacccct
cagtcctcgcagggctacgagaacatgaatgaaaagaactcgggggcgaagaggaagatc
gcgctggcccgagagcgcaaaacggtgaaaacgctggggatcatcatgggaactttcatc
ttctgctggctgcccttcttcatcgtcgcgctggtgctgcctttctgtgcggagagctgc
tacatgcccgactggcttggcgcagtcataaactggctgggctactccaactctctcctc
aaccccatcatatatgcctacttcaacaaagacttccaaagtgctttcaagaagatttta
aaatgcaaattccacaggccgtaa
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