Lates calcarifer (barramundi perch): 108882645
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Entry
108882645 CDS
T04895
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4b
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108882645
04082 Neuroactive ligand signaling
108882645
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108882645
Ion channels [BR:
lcf04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
108882645
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Ortholog
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
108882645
NCBI-ProteinID:
XP_018530798
UniProt:
A0A4W6CM84
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Position
LG6:complement(5709046..5719586)
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AA seq
639 aa
AA seq
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MDIYKCLSLLFFTLPPQVCSQVGPRAHAEERLLQDLFAHYNKLSRPVENTSDTVLVHFGL
SIAQLIDVDEKNQMMTTNVWVKQEWNDYKLRWNPEKYENVTSIRIPSEIIWRPDIVLYNN
ADGDFAVTHLTKAHLFHDGRIKWMPPAIYKSSCSIDVTFFPFDQQSCKMKFGSWTYDRAK
IDLISMDSDVDQMDYWESGEWVIMNAVGKYNTKKYECCTEIYADITYYFIIRRLPLFYTI
NLIIPCLLISCLTVLVFYLPSQCGEKITLCISVLLSLTVFLLLITEIIPSTSLVIPLIGE
YLLFTMVFVTLSIIITVFVLNVHHRSPQTHGMPHWVRRVFLDLVPRVLFMKRPPGTAKQH
CKKLIEMMHRPATISATGNSQAFWMGLETELRQMAQLENTLPKTPSDSPSILVCSPSPPS
SPLEDHTEGDHPLKANIFSRSTSGQYSVLSDKQPLRGHNSAASSSSQLSLPPSLPLCPLR
SLSREEPNTLAPNGRSHSVEQMCDQQKELPQRAGHRCRSRSFQYCCLHDEGRGVMGITGR
VKKQALQTPTETLTAEATKDASTQQDIMVPTISPAMQRAIEGVQYIADHLRAEDADFSVK
EDWKYVAMVIDRIFLWMFVLVCILGSVGLFLPPWLAGMI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggatatatacaaatgtttaagcttacttttcttcactcttcctccacaagtttgttcc
caagttggacctcgtgcccatgctgaagagaggctgctccaggatctgtttgcacattac
aataagctttcccggcctgtagaaaacacttcagacaccgtgctggttcactttggactg
tctattgcacagcttattgatgtggatgagaagaatcagatgatgactacaaatgtctgg
gtcaagcaagaatggaatgattacaagctccgctggaacccggagaaatacgaaaatgtc
acctccatccgtattccttcagagatcatctggaggcccgacattgtcctctacaacaac
gctgatggtgactttgcggtaactcacctcacgaaagctcatctgttccacgatggtcgg
ataaagtggatgccaccagcaatttataagtcttcatgcagcatagatgttacctttttt
ccttttgaccagcaaagctgcaagatgaagtttggctcgtggacctatgatcgtgccaag
attgatctgatcagcatggacagtgacgtggaccagatggactactgggagagtggcgag
tgggttatcatgaatgctgtgggcaagtacaataccaaaaagtatgagtgctgcacagag
atctatgccgacatcacttactacttcatcatccgaaggcttccgttgttctacactatt
aaccttattatcccttgcctgcttatctcatgtttgacagtgctggtgttttatttgcca
tcgcaatgtggagagaagattaccttgtgtatctcagtgttactgtctctaacagtgttc
ctcctgctgatcacagagatcataccgtctacatcgctggtgattccactgattggtgaa
tacctgctgttcaccatggtctttgtcacgctctccatcataattactgtctttgtgtta
aatgtacatcaccgctcgccacaaacccatggcatgcctcactgggtgcggagagtattc
ctggacttggtgcctcgagttctcttcatgaagcgtccgccaggcacagcaaagcagcac
tgcaagaagcttattgagatgatgcaccgtccagccacgatatctgcaacaggcaactca
caagctttttggatggggttagagacagaattgagacaaatggcacaactagagaataca
ctcccaaagacaccgtctgacagtccaagcattcttgtgtgctcaccttctccaccatct
tcccctcttgaggaccacactgagggagatcacccactgaaggccaacattttcagccgg
tccacatccggtcagtattcagttctctcagacaaacaacccctacgtggacacaactca
gcagcctcgtcctcttcccagttgtccttgcccccatctttgccactctgcccgcttcgc
agtctgtccagggaagaaccaaatacactggccccaaacggccgctcccacagtgtagaa
caaatgtgtgaccaacagaaggagcttcctcagagagctgggcatcggtgtcgctcccgc
agcttccagtactgctgtctgcatgatgaagggcgtggggtcatggggatcacagggagg
gtgaaaaaacaagccctacagacccctacagaaaccctcacagcagaagccactaaagat
gcgagtactcagcaggacatcatggttccaactatttccccagctatgcaacgggccata
gagggagttcagtacattgctgatcatctcagggcagaggatgcagacttttcagtgaag
gaggactggaagtatgtggccatggtcattgacaggatattcctctggatgtttgtactg
gtctgcatactgggatctgtgggactctttcttcctccttggctggctggaatgatctag
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