Lates calcarifer (barramundi perch): 108882647
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Entry
108882647 CDS
T04895
Name
(RefSeq) excitatory amino acid transporter 3 isoform X1
KO
K05612
solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter), member 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
108882647
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcf02000
]
108882647
Transporters [BR:
lcf02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
108882647
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Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
108882647
NCBI-ProteinID:
XP_018530803
UniProt:
A0A4W6CM82
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Position
LG6:complement(5690550..5697629)
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AA seq
523 aa
AA seq
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MERGEEEDISAIGGGGSVMKRCWNYLQRNKFLVLNLSAVVLGIALGLFLKLYVHMSEFDQ
LYIGFPGEILMRMLQLVTVPLIVTSVITGVSRLSAETSRRIAQRAAAYFVSTTLVSVTIG
LILVLIIKPGIAYGSKNDESEVEEAFSTVDALLDLARNMIPQNLIQACFRQYKTERVEFP
KEADEQNSSMEMNATEVQLVGHFVEGSNTLGLIVWSFIFGLTLHKMGERGKILVEILTVL
NEVTKCVVNLILSYLPFGVLFMITSHVVEVHDWETTFKLGKFMVVVIIGLIIHGGIVLPL
IYFVCVRHNPAAVIKGISPALLTALVISSSSATLPLTFRCCEDRLNIDKRITRFMLPIGT
NINMDGTALYEVAAAVFIAQLNHIDLDFSQLLTISVTSAVSSIGAAGIPATGAVTTLFVL
TAVGLPAKEASILVVVEWILDRCNTAINVMGDCIGVCLVYHVSKKELEQMDEQWQEMSSD
AEGYTLGGIQVHLTGQDSGDDDSLYTPVETPQDGDKEEEYFSQ
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagaggggggaagaggaggacatttcagccatcggaggcggtggcagcgtgatgaag
agatgctggaactatttacagcggaataaatttctggttttaaatctgtcagctgttgtt
ctgggtattgctctgggcttgtttctcaagctctatgtccatatgtcagagttcgaccaa
ctgtacattggttttcctggggaaatactcatgcgaatgcttcagctggtcacggttcct
ctcatcgtgactagtgtaataacgggtgtttctcgtctaagtgctgaaacctccagaaga
atcgctcagcgtgcagcagcatactttgtctcgaccactcttgtatctgtgaccataggt
ctgatactggtcctgattatcaagcctgggattgcttatggtagtaaaaacgatgagtca
gaagttgaggaagccttctccactgttgatgccttgttggatcttgccaggaacatgatc
ccacaaaacctgattcaggcttgcttcagacagtacaagactgaaagggtggagtttcca
aaggaagcagatgagcaaaattctagcatggaaatgaatgcgacagaggtgcaactggtg
ggccactttgtggaaggatccaacacactgggcctcattgtctggtcttttatttttggc
ctgaccctccacaagatgggagagagagggaaaatcctggtggagatccttactgtcctg
aatgaggtcacaaaatgtgtggtcaacttgatactgagctacttgccatttggggtgctt
ttcatgattacaagtcatgtcgttgaagtccatgactgggaaactacattcaaacttgga
aagttcatggtagtggttattattggccttataatccatggaggaatagttttaccactt
atctattttgtgtgtgtgagacataacccggctgctgtcatcaagggcatttctcctgcc
ttactgaccgcactggtcatctcatccagctctgccacactgccgctcactttccgatgt
tgtgaggacagactcaacattgacaaaagaatcactcgcttcatgctgcccattgggact
aacataaacatggacggaactgccctttacgaagtcgctgcagcggttttcatcgcccag
ctcaaccacatagatctggacttcagccagttacttaccatttctgtgacatcagcagtg
tccagcataggagcagcagggatccctgctacaggagcagtgaccactctgtttgttttg
acagcagttggtttacctgcgaaggaagcctccattctagtcgtagtagaatggattcta
gaccgctgcaacactgctatcaatgtcatgggagactgcattggtgtttgcctagtttac
catgtgtcgaaaaaagaactggaacaaatggatgagcaatggcaggaaatgtcaagtgat
gctgagggctacacccttggtgggatccaggtccacctcactggtcaggactctggtgat
gacgacagcctttacaccccagtagaaacgccccaagatggtgacaaagaagaagagtat
ttcagccagtaa
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