Lates calcarifer (barramundi perch): 108882678
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Entry
108882678 CDS
T04895
Name
(RefSeq) keratin, type I cytoskeletal 18
KO
K07604
type I keratin, acidic
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108882678
04147 Exosome [BR:
lcf04147
]
108882678
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
108882678
Exosome [BR:
lcf04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108882678
Exosomal proteins of other body fluids (saliva and urine)
108882678
Exosomal proteins of colorectal cancer cells
108882678
Exosomal proteins of melanoma cells
108882678
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Gene cluster
GFIT
Motif
Pfam:
Filament
PrgU
Lzipper-MIP1
Nbl1_Borealin_N
SOAR
Lectin_N
Motif
Other DBs
NCBI-GeneID:
108882678
NCBI-ProteinID:
XP_018530854
UniProt:
A0AAJ7LS81
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Position
LG6:complement(4211743..4214794)
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AA seq
427 aa
AA seq
DB search
MEPLFKRQTSQNYGYHLEGIQRPLQMHRGYAHSVSGGAGGHGTRISTVTYGTRVGSGFSG
GYDYQSSGSTSGTLGIANEKLTMQHLNDRLASYLETVRNLEKANSKLEIKIREAIEKRGP
LEGRDYGKYNAIIAELRAKIFDMIKDNAHLAIALDNARLASDDFRVKMEYEMSMRQTVEA
DVARLRKVLDDTNVIRLHLESDIESLKEELISLKKNHEADVAELRAQITQVGVHVDVDAP
KGQDLSKIMEEMRAKYEKIALKNQEELKAWHESQITEVQIQVTESTEALKEATSVMTETR
RRYQALDIEMQSALSLKASLEATLRDIEMRYNMEVEKYNNIILRLQEELTQIRTDIQHNT
REYDHLLNIKVKLEAEIAEYRRLLDGGADLKLEDAVDKKTVQTKVVTVTQTLVDGKVVSE
SKDVKSS
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctgtttaaacgccagacttctcaaaattatggttaccatttagaaggtatt
caaagacctcttcagatgcaccggggctacgcgcacagtgtcagcggtggggcaggtggt
cacggtaccaggatctccactgtcacatatggcacacgggttggcagtggcttcagcggt
gggtatgactaccagtcttctgggtccacctctggaaccctgggcatcgcaaatgagaag
ctaaccatgcagcacctgaacgaccgtctggccagctacctggagaccgtcaggaatctg
gagaaggccaacagcaagctggagatcaaaatcagagaggccatcgaaaagagaggcccc
ttggaggggagggactacggcaagtacaacgccatcattgcagagctgagggccaagata
tttgacatgatcaaggacaatgcacatcttgctatcgctctggacaacgcacgcctggct
tcagatgacttcagagtcaagatggagtacgagatgtccatgcgtcaaacagtggaggcc
gatgttgccagacttaggaaggttctggatgacaccaacgtaattcgtctgcacctggag
agcgacatcgagtctctaaaggaagagttgatcagcctgaagaagaaccatgaggctgat
gttgctgaattgcgtgcccagatcacccaagttggtgtccacgtggatgttgatgctcct
aaaggacaggacctgtccaagatcatggaggagatgagggccaagtatgagaagatagca
ctgaagaaccaggaggaactcaaagcatggcatgaatctcagatcacagaggtgcagatc
caagtgactgagagcacagaagccctaaaggaagccacaagtgtaatgactgaaactaga
agaaggtatcaggcactggatattgaaatgcagtctgcgcttagtctgaaagcgtccctg
gaggccaccctccgtgacatcgagatgcgttacaacatggaggtggagaagtacaacaac
atcatcctgaggctgcaggaggagctgactcagatccgcaccgacatccaacataacaca
agagagtacgatcacctgctcaacatcaaggtgaaactggaggccgagatcgcagagtac
aggagactgctggacgggggggcagatttaaaactggaggatgcagttgataagaagacg
gtccagacaaaagtggtgacagtcactcagactctggtggatggcaaagtggtgtcagag
agcaaggatgttaaatccagttaa
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