Lates calcarifer (barramundi perch): 108882711
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Entry
108882711 CDS
T04895
Symbol
gabra6a
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6a
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
lcf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108882711 (gabra6a)
04082 Neuroactive ligand signaling
108882711 (gabra6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108882711 (gabra6a)
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108882711 (gabra6a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Beta-prop_CATSPERD
Motif
Other DBs
NCBI-GeneID:
108882711
NCBI-ProteinID:
XP_050928183
UniProt:
A0AAJ8DQY4
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Position
LG8:9451202..9459540
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AA seq
373 aa
AA seq
DB search
MEYTMDMFFRQMWVDERLKFEGPTEILRLNNLMVDKIWTPDTFFRNSKKSISHNMTTPNK
LFRIMQNGTVLYTMRLTISAECPMRLMDFPMDGHSCPLRFGSYAYTSSEIMFTWRKGPIA
SVDCPKESMSLLQYDLVGQTLSSEIFKSNTGHYSVQVVHFHLQRKLGYYLIQTYIPLIMV
VVLSQVSFWINKESVPARTVAGITTVLTMTTLSISARQSLPKVAYATAMDWFIAVCFAFV
ASALVEFAAVNYFATLQANRLKKQKARQDKLEVLATGSDDDDTVSSDSSPREGLKRRNHS
VCHSEPGDAPPLPIFLQQGSAFPQIPQLAGTSPIDKYARVLFPLAFALFNLVYWYIYLAK
DTMERARDADLKN
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggagtacactatggacatgttcttccgtcagatgtgggttgatgaacgtctgaagttt
gagggccccactgaaatcctgcggctgaacaaccttatggtggacaagatctggacccca
gatactttcttcagaaactccaagaagtccatttcccataacatgaccacaccaaacaag
ctcttccgcatcatgcaaaatgggactgtcctctacactatgagacttacaatcagtgca
gagtgtccgatgaggctgatggacttccccatggacggccactcctgtcctctcaggttt
ggaagctatgcctacacgagcagtgagattatgttcacctggaggaaggggccaatagca
tctgtcgattgtcccaaggagtccatgagtcttctgcagtatgatctcgtgggacagact
ctgtccagtgagatattcaaatcaaatacaggtcactactctgtgcaggtggtccatttc
cacctccagaggaagctcggctactacctcatacagacctacatccccctcataatggtt
gtcgtgctgtcacaagtctctttttggattaacaaggagtctgttcctgcacgtacagtt
gctggcatcaccacagtgctaacaatgaccaccttgagcatcagcgcccgtcagtcactt
cccaaagtggcctacgccaccgccatggattggttcatcgctgtgtgttttgcctttgtg
gcatccgctctcgtcgagtttgcagcggtaaactactttgccaccctccaggccaaccgt
ctgaagaaacaaaaagccagacaggacaagctagaggtgttggctacgggcagtgacgat
gacgacacggtttcgtcggacagtagccctcgggaaggcctgaagaggagaaaccactca
gtgtgccacagtgagccaggagatgctccgccactgccgatcttcctccagcagggttca
gctttccctcagatcccgcagctggccggcaccagccccatcgacaagtacgcccgcgtt
ctctttcccctggccttcgcgctcttcaacctcgtctactggtacatctacctggccaag
gacaccatggagagggccagggacgcggatctcaaaaactaa
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