Lates calcarifer (barramundi perch): 108882732
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Entry
108882732 CDS
T04895
Symbol
cnot7
Name
(RefSeq) CCR4-NOT transcription complex subunit 7
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108882732 (cnot7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108882732 (cnot7)
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108882732 (cnot7)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108882732 (cnot7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
108882732
NCBI-ProteinID:
XP_018530909
UniProt:
A0A4W6BSE3
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Position
LG8:complement(5188893..5195190)
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AA seq
286 aa
AA seq
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MPAATVDHSQRICEVWANNLEEELKRIRHVIRKYNYIAMDTEFPGVVARPIGEFRSNADY
QYQLLRCNVDLLKIIQLGLTFMNEQGEYPPGTSTWQFNFKFNLTEDMYAQDSIELLTTSG
IQFKKHEDEGIETLYFAELLMTSGVVLCDGVKWLSFHSGYDFGYLIKILSNANLPEEEVD
FFEILRLYFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFK
MREMFFEDHIDDAKYCGHLYGLGSGSAYVQNGTGNAYEEEANKQQS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagctactgtggatcacagccaaagaatatgtgaggtttgggccaacaacctg
gaggaggagctgaagaggatccgacatgtcatccgaaaatacaactacattgctatggac
acagagtttccaggtgtagtcgccagaccgatcggagagttcagaagcaacgctgactat
cagtaccagctactgcgctgcaatgtggatttgctcaagataatccagctgggcctcaca
ttcatgaacgaacaaggggaatatcctcctggaacatcaacatggcagttcaattttaag
tttaacctcacagaggatatgtatgcacaggactccattgagctcctgaccacttcaggg
atccagttcaagaagcacgaggacgaaggcatcgagacgctatactttgcagagctgttg
atgacatcaggagtggtgctctgtgatggggtcaagtggctttcttttcacagcggctat
gactttggatacctgatcaagattctgtccaatgctaacctacccgaggaggaggtggac
ttttttgagattctacgcttgtacttcccagtcatttatgatgtcaagtacctcatgaag
agctgtaaaaacctgaagggtgggctgcaggaagtagctgaacagctggaactggagagg
attggaccacagcatcaggctggttccgactctttactcacaggcatggctttcttcaag
atgagagagatgttctttgaagatcatattgacgatgcaaagtactgtggtcacttgtac
gggctcggctctggctcggcctacgtccagaacggaacaggaaacgcttacgaagaggag
gctaacaagcagcagtcgtga
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