Lates calcarifer (barramundi perch): 108882772
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Entry
108882772 CDS
T04895
Symbol
stag2b
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108882772 (stag2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lcf03036
]
108882772 (stag2b)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
108882772 (stag2b)
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Paralog
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
AdoHcyase_NAD
Motif
Other DBs
NCBI-GeneID:
108882772
NCBI-ProteinID:
XP_018530977
UniProt:
A0AAJ7PLF9
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Position
LG8:complement(5991943..6015542)
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AA seq
1273 aa
AA seq
DB search
MIAAPEIPTEFSYTQDTDTRFSSDTDFSEDPDGRSANSTKGKGGKKGKKAAGEKGKGGKG
AGRLNGHHQENGMENMMLFEVVKLGRSAMQSVVDDWIESYKHDRDVALLDLINFFIQCSG
CKGVVSGEMFRNMQNSEIIRRMTEEFDEDSGDYPLTIAGPQWKKFKSSFCEFISVLVRQC
QYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNTQR
QYEAERNKAVPKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDSIAEIRA
ICIEEIGVWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNARLEL
FTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLNSTDEVLTPEDCESVYHLVYSAHRPVAI
AAGEFLFKKLFSQREPEEEGAPKRRGRQSPNANLIKTTVFFFLESELHEHAAYLVDSLWE
CGAELLKDWECMISLLLDEPLPGEEALTDRQETALIEIMLCTVRQAAECHPPVGRGTGKR
VMTAKEKKTQLDDRTRMTELFAVALPPLLAKYAVDAEKVTNLLQLPQFFDLEIYTTGRLE
KHLESLLRQIREIVEKHTDTEVLEACSKTYHALCNEEFTIFNRVDIARSQLLDELVDKFN
RLLEDFLQEGEDADEDDAYQVLSTLKRITAFHNAHDLSGWDLFTSNFKLLNTGIENGDMP
EQIVIHSLQCTHYVILWHLAKLSEGSSRKDDLVTLRKQMRAFCMMCQRYLTNVNTAVKEQ
AFTILCDLLLIFSHQMVSGGREHLEPLVYSPEDSLQSELLSFILNHVFIDQDDDTNSTDG
QQDDEAVKIEALHKRRNLLAAYCKLIIYCVVEMKTGADIFKQYMRYYNDYGDIIKETMSK
TRQIDKIQCAKTLILSLQQLFNEMLSELGHGFDRSSSAFCGIKELARRFSLTFGLDQVKT
RDAIAMLHKDGIEFAFKDPSPQGEGGPPLNLAFLDILSEFSSKLMRQDKRTVHMYLERFM
TFQMALQREDCWLPLISYRNSLQAGGDDDTMSVMSGYSSRGSSIRSKKTKPPAATAGTSA
AKRKLPEEESSSSSEVWQQTMQTPVMMPSPHLTSTAIRDPKRGRDDSYMGVYPIPHDQQQ
PHQHPQHHQQTPQHHQTPMDYNSQVTWMLAQRQQEEARQQQERAMNYAKLRTNLQHAIRR
GTGLMEEDEEPIVEDVMMSSEGRMDDLNEGMDFDTMDIDLPPSKNRRERSELKPDYFDPA
SIMDESVLGVSMF
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcaccagaaataccaacagagttctcctatactcaggatacagacactcga
ttctcttcagacacagacttctctgaggatcctgatggaaggagtgcaaactcaactaaa
ggaaagggtggaaagaaggggaagaaggcagcaggggagaagggcaaaggaggaaaggga
gcaggtcggttaaatggccaccaccaggagaatggcatggaaaacatgatgctgtttgag
gtggtgaagctgggcaggagtgcaatgcagtctgtcgttgatgactggattgagtcttac
aaacatgacagagatgttgcgctactagatctcatcaatttcttcatccagtgttcagga
tgtaaaggtgtggtcagtggagaaatgttccgcaacatgcagaactctgagatcatccga
cgaatgacagaggagtttgatgaggacagcggtgactaccctctaaccatagctgggccc
caatggaagaagttcaaatcaagcttttgtgaattcatttcggtgctagtgcgccagtgt
caatacagtatcatctatgatgagtacatgatggacacagtcatctctcttcttaccgga
ctatcggactcccaagtccgagccttcagacacacctcaacactggcagccatgaagctg
atgacagccctggtgaatgtagctctaaacctgagcatcaacatggacaacacccagcgc
cagtatgaggcagagaggaataaagcagtccccaaaagggccaatgacaggctagagctg
ctcctgcaaaagcgcaaagagctccaagaaaatcaggatgaaattgaaaacatgatgaat
gcaatattcaaaggcgtgtttgtccacagatatcgtgattcgatagcagaaatcagggca
atctgtatagaagagattggagtgtggatgaaactctatagcgatgccttcctcaacgac
agctatctgaagtatgtgggatggacaatgcatgataagcaaggtgaggtacgtctgaag
tgtctgacagctctacagggtctctactacaacagagagctcaatgcaagattggaactc
ttcaccagtcgcttcaaggatcgtattgtctccatgactcttgacaaagagtatgatgtt
gctgtacaagcaattaaactactcacactagtcttgaatagtacggatgaggtgttgacc
cctgaggactgtgagagtgtctatcacttggtctactcagcacacaggcctgtcgccatt
gcagctggagaattcctctttaagaaattgttcagccaacgggaaccggaggaggaaggt
gcccccaagagaagaggcagacaaagccccaacgccaacctcattaagaccactgtcttc
ttcttcctggagagtgagctccacgagcatgcagcctacctagtggactccctctgggaa
tgtggtgcagagctactgaaggactgggagtgtatgatcagcttactgctagatgaacca
ttaccaggagaggaagctcttacagacagacaagagacggctttgattgaaatcatgctg
tgcactgtacgccaggctgctgaatgccacccacctgttggaagaggcacagggaagagg
gtaatgacagctaaagagaaaaagactcagctggatgacagaaccagaatgacagagcta
tttgctgtggctttgccccctctactggccaagtatgctgtggatgcagagaaggtgacc
aacttgttgcagctgcctcagttctttgacctggaaatttataccacgggacgtctggag
aagcacctggaatccctgctgcgtcagatcagggaaattgtggagaagcacacagacact
gaagttttggaggcctgctccaagacttaccatgccctctgcaatgaggagttcacaatc
tttaatagggtggacattgcccgctcgcagctgcttgatgagctggttgacaagttcaac
aggctactggaggattttctgcaagagggtgaagatgctgatgaagatgatgcgtatcag
gttttgtcaactctaaagaggatcacagcatttcacaatgcacatgacctgtcagggtgg
gacctttttaccagcaacttcaagctgctcaacactggcatagagaacggagacatgcct
gagcagatagtcatccactcactgcagtgtacccactacgtgatcttgtggcatctggcc
aagttgtctgagggcagctccaggaaggatgacctggtgaccctgaggaagcagatgagg
gcattctgtatgatgtgtcagcgctacctcaccaatgtcaacacagccgtcaaagaacag
gcattcaccatcctgtgtgatctcctgctcatcttcagccaccagatggtgtccggaggc
agggaacacctggagccccttgtctattccccagaggactcgctgcagtctgaactactc
tccttcatcctgaaccatgtcttcatagaccaggacgatgacacaaatagcacagatggg
caacaggatgatgaggctgtaaagattgaagctctgcacaagaggagaaacctcctggct
gcctactgtaaactgatcatctactgtgtagtagaaatgaaaaccggagctgatatcttc
aagcagtacatgcggtattacaatgattatggtgacatcatcaaggagactatgagtaag
actcggcaaatcgataaaattcagtgtgccaagacactcatcctcagtctgcagcagctg
ttcaatgaaatgctgtctgaactgggtcatgggtttgatcgctcctcctctgcattctgt
ggaatcaaagagttggcccgtcgtttttctctaacctttggtctcgaccaggtcaaaacc
agagatgccatcgctatgctgcacaaggatggtatcgagtttgcatttaaggatcctagt
ccccagggagaaggaggccctcccctcaacctggctttcttagacatcctcagcgagttc
tcctccaagcttatgagacaagacaagaggactgtccacatgtacctggagcgcttcatg
acattccagatggcactgcagcgagaggactgctggctccccctcatctcctacaggaat
tccctgcaggctggtggtgatgacgatacaatgtcggtgatgagtggctactccagcaga
ggctcttccattcgctccaagaagaccaagcctcctgcagctacagctggaacctcggca
gccaagaggaagctgccagaagaggaaagcagcagcagcagtgaggtgtggcagcagacc
atgcagacccccgtcatgatgccgtccccccacctcacctccactgcaatacgagaccct
aagaggggtcgtgatgatagctacatgggggtctaccccatccctcacgaccagcagcag
ccccaccaacacccacagcaccatcaacagacgcctcagcaccaccagacacctatggat
tacaattcccaggtgacgtggatgctggctcagagacagcaagaagaggcacgccagcag
caggaaagagccatgaactatgccaagctcagaaccaacctgcagcatgctattcgtcgc
ggcactgggctcatggaggaagacgaagagccaattgtggaggatgtgatgatgtcatct
gagggtcgtatggatgacctcaatgaaggcatggactttgacaccatggacattgatctg
ccaccctctaagaaccgtcgtgagaggtctgagctcaagccagattactttgaccctgct
tctatcatggatgaatcggttcttggggtgtccatgttttaa
DBGET
integrated database retrieval system